FMO08486.5prime Sequence
614 bp (614 high quality bases) assembled on 2010-06-07
> FMO08486.5prime
CAGTCGACATGATGAGTGAAGAAGTAATTGCTAAGAACATTTCCTTGTCA
AGTCTTACCTACCCAAAGCGTATACCAAAGATTAAGTTCGGTCCTATCAA
GGACGAAATGGGTTTCACGCTCAGCGAAAGAATGGCCCTCAGACAGGCGT
GGAACTTGGTCAGACCCTTTGAGCGGCGCTACGGTCAGGACGTATTCTAT
AGCTTCCTAAATGATTACTATTGGGGTATTAAGAAGTTCCGGAACGGAGC
TGAGCTCAACGTGAAAGCCCTGCACTCGCATGCCCTGCGATTTATTAACT
TTTTTGGACTTCTAATCGAGGAGAAGGATCCAGTAGTGTTCCAGCTGATG
ATAAACGACAACAACCATACCCACAATCGCTGCCATGTGGGCTCCGTTAA
TATTGGGCATCTGGCCCAGGCCCTGGTGGACTATGTGCTAAAGGTGTTCC
ATAAGGTCAGCTCTCCATCGCTGGAACAGGGTTTGAGCAAACTCGTGGAG
AAGTTTCAGAACTACCAGGACCAGCAGTCGAATACCTCCGGATACAATCG
CCTGAGCAAGGTTAACTTTGATTCACGACCGCCCAGAGGTAACCCAGCAA
GCTTTCTAGACCAT
FMO08486.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob3-RA | 1118 | CG14675-RA | 93..680 | 9..596 | 2925 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5830393..5830599 | 201..407 | 1035 | 100 | Plus |
| 3R | 32079331 | 3R | 5830154..5830347 | 9..202 | 955 | 99.5 | Plus |
| 3R | 32079331 | 3R | 5831158..5831347 | 407..596 | 950 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:07:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 1021..1052 | 67..98 | 106 | 81.2 | Plus |
FMO08486.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:36:06 Download gff for
FMO08486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob3-RA | 93..680 | 9..596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:59 Download gff for
FMO08486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob3-RA | 93..680 | 9..596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:05 Download gff for
FMO08486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob3-RA | 93..680 | 9..596 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:05 Download gff for
FMO08486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5830154..5830347 | 9..202 | 99 | -> | Plus |
| 3R | 5830395..5830599 | 203..407 | 100 | -> | Plus |
| 3R | 5831159..5831347 | 408..596 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:59 Download gff for
FMO08486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1656881..1657069 | 408..596 | 100 | | Plus |
| arm_3R | 1655876..1656069 | 9..202 | 99 | -> | Plus |
| arm_3R | 1656117..1656321 | 203..407 | 100 | -> | Plus |
