FMO08487.5prime Sequence
641 bp (641 high quality bases) assembled on 2010-06-07
> FMO08487.5prime
CAGTCGACATGGCCGAGCAGCATTATAATGCAAATGATTTGGCTTCCGAT
CCAAATTCGCGTAAATTGAAGTTTGCCGGCATTTGCAAACTAAATAATAA
CGAGCTGTCGAGTCTCTACAATATCGACAAGTTGACCGACGAGGAGCTGG
CGTCCGTGAATCTGGATAGGAGCTCCCTGATCGATGACTATCGTCTACTG
CACGAGGTGTCGCAGATGAAGCAAATAGAGAATGAAGCAAATAATATCCC
TGCTGCTGCTCCAGCAGGACAACCAAAATCCAAGGAGTTGCATGAGCAAT
TCGTAAAAGAGATGGAGAAGTACCTTACCAATAAGAAGTACACATTTCCG
ATGCTCAACCATTTGATCAAGTTAATGAGTTGGGAAGTGGAGCCGGAGAC
CATTTTCAACGAAAAGGCGTTTCAGATTGATGTCAATTACCATGAGGACG
AGGAGGTAATGCAGCTGGAGCCCAATGAGCGTCTGTTTCGTCGCCTCAAG
TCCATCTACGATCATCTGGAGGACATGTTCATCAACGGCAATCGCAGAAC
GGCCTCCGACCTGGTCTTCACCGCAATTATCCGTTTGGTCGACCGCTCTA
ATGTGGCAAAATATAAAATCATAGCAAGCTTTCTAGACCAT
FMO08487.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14708-RA | 725 | CG14708-RA | 45..659 | 9..623 | 3075 | 100 | Plus |
| CG15375-RB | 1232 | CG15375-RB | 133..314 | 57..238 | 385 | 80.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11554189..11554803 | 9..623 | 3075 | 100 | Plus |
| X | 23542271 | X | 4101450..4101631 | 57..238 | 385 | 80.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:07:21 has no hits.
FMO08487.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:36:03 Download gff for
FMO08487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14708-RA | 1..618 | 9..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:53 Download gff for
FMO08487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14708-RA | 38..662 | 1..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:57 Download gff for
FMO08487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14708-RA | 38..662 | 1..627 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:57 Download gff for
FMO08487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11554182..11554806 | 1..627 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:53 Download gff for
FMO08487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7379904..7380528 | 1..627 | 99 | | Plus |
