FMO08515.5prime Sequence
875 bp (564 high quality bases) assembled on 2010-06-10
> FMO08515.5prime
CAGTCGACATGTGCACTCTGCACCCCGAGGAGGAAGCTCACCTGATGGCC
ATGGCCAGCGGAGGACAACCAACGCGTACGGCCAGTCCAAGGCCATTGGT
CACCGCCTCCATTGCAGCACCACGATCGCTGTTTGATGTCTGCTGGGACG
ATGTGCTCATCCCGCAGGTTGCCGTCTACCTGTCGCTCAAGGATCTCTTC
AACCTGCGCTGCTGCTCCCGTACCGCACAACGCTTTGTGGAGGCTGCGCT
GGAAAAAAGGCAGGAACTTCATCTCTCTGGGAACAACACAAAGAATATCG
ACGTGGCCTTTCGAGTGCTGGCCCGATGTTGCCAACGATTGGAGGTGCTT
CATCTGGCCTGCTGCCGATGGCTAACAGATGAGCTGCTGCTGCCACTGCT
GGCCAAAAAACAAGAAACGCCTGTGGGCCGTCAACCTGAACGAATGCGTC
AACATCACGGCCCTTTCGCTGCAGCCGATCATAGTGGAGTGCAAGGAGCT
GCGCGTACTCAAGCTGTCCAAGTGCCAGTGGCTGACCACGGGAGCAGTGG
ACGCTTTGACGCTGCAACAAAGCAAGCTGGTGGAGTTCGACACTCCTATT
GCGGCGCAATTTGGAGAGCGCTTGCTTGAATAATTTTCTTCAAGAAACTT
AACAAGCTTCACCGTTCCTGGTGCTGGGCAAATACGCCCAAGTGTCACCG
ATCAAGTGCTCATCCAAATCGGGAACTATTGGCCGCGAACTGGAACACAA
TCAACGTGGATCGGGTGGTGCGGGCTATCTTCGACTATGGCGTGCACGCT
TTGACAGTGCACTGTTTGCGGCTACGACTTGCTCATTCGACGTTGTCGCG
GGTCACAGACTCTCCTGCGCGCTCG
FMO08515.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jet-RA | 1453 | CG8873-RA | 111..960 | 8..865 | 3715 | 96.8 | Plus |
| jet-RB | 1241 | CG8873-RB | 111..887 | 8..796 | 3450 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4948898..4949674 | 796..8 | 3100 | 97 | Minus |
| 2L | 23513712 | 2L | 4948706..4948771 | 859..797 | 200 | 93.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:11:25 has no hits.
FMO08515.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:38:21 Download gff for
FMO08515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| jet-RB | 72..863 | 1..805 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:29 Download gff for
FMO08515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| jet-RA | 105..969 | 1..875 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:36 Download gff for
FMO08515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| jet-RA | 105..969 | 1..875 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:36 Download gff for
FMO08515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4948690..4948771 | 797..875 | 91 | <- | Minus |
| 2L | 4948898..4949677 | 1..796 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:29 Download gff for
FMO08515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4948690..4948771 | 797..875 | 91 | <- | Minus |
| arm_2L | 4948898..4949677 | 1..796 | 96 | | Minus |
