FMO08524.5prime Sequence
875 bp (-84 high quality bases) assembled on 2010-06-10
> FMO08524.5prime
CAATCGACATGGCACACCTGCGGGAGACCTCGGACAAGGCGCTGAAGCTG
TTGCGTACTTTACCGCGCGTTCAAATCGGCAATCTGCGACCAAATCCAAA
CTCAAAACAGAATGACAAGCGCGGCAGGGCTCAACACGGAGGAGATAAGC
ACGGAGCGGGCAACAAGGGATCCGGTCAGCGGCAGAACTTCATGCGATTG
GGCTATGAAACGGGCAATCAGCCCTTCTACTTGAGATTTCCCTACGAGCC
CTACTACAAGGGACACCACCTAAAGCGCCAGTATCCGCCCATTTCGCTGC
TCCAACTGCAAGTGCTCATCGACACGAACCGCATAGACATCAGCCAGCCC
ATCGACATCAGCACGCTGTGTAACTCTGGCCTCCTGAAACTGAAACCCGC
TGAAATGGAGTACGGTTTCCAGCTGACGGACGATGGGCTGGACAATTTCC
AGGCTAGATCAACATTGAGGTGCAGCACGCCAGCGAGGCGGTCATAGCGG
CCATAGAGAAGAACGGCGGTGTAATCCGTACGGACTATTACAATCCACGC
AGCCTTCACATGCTGGCCAATCCGAAGAAGTGGTTCGAAAAGGGAGTACC
TATTCCTAGCCGCATGCTGCCGCCCCAGGATGCAGTGGACTACTATACGG
ATCCCAAGAATCGCGGCTACCTGGTCAATCCCGAGGCGATCAGCCAGGAC
CGCCTAGTTCTGGCCCAGAAGTACGGCTATCAGCTGCCCAAATTGAGGAA
GATTCCGCGTACGATATGCTCACCACAGCGAAGATCCAAGGCAAGTATTC
TACGGCTGAACCCGGCTGGCTGATCACATAGTGCACAAACGATCATTAAG
CGCAAGCAGCAGCTTTCTAGACCAT
FMO08524.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL15-RA | 1029 | CG5219-RA | 120..976 | 9..858 | 4020 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20435163..20435914 | 858..114 | 3340 | 98.1 | Minus |
| 3L | 28110227 | 3L | 20435985..20436090 | 114..9 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:58:50 has no hits.
FMO08524.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:38:22 Download gff for
FMO08524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL15-RA | 75..944 | 1..865 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:28 Download gff for
FMO08524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL15-RA | 113..982 | 1..865 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:39 Download gff for
FMO08524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL15-RA | 113..982 | 1..865 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:39 Download gff for
FMO08524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20435157..20435914 | 114..865 | 97 | <- | Minus |
| 3L | 20435986..20436097 | 1..113 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:28 Download gff for
FMO08524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20428257..20429014 | 114..865 | 97 | <- | Minus |
| arm_3L | 20429086..20429197 | 1..113 | 96 | | Minus |
