FMO08527.5prime Sequence
920 bp (920 high quality bases) assembled on 2010-06-10
> FMO08527.5prime
CAGTCGACATGCTGCGAAAACAAGCCAGACAGCGAAGGGAATACCTGTAC
AATAAAGCGCTCACTGAGCGCCTCAAGTCCAAACAAAAAATCCAGGAGAC
CGTTGTGAAAAGCATTAATGAAAACAAAGCAATTGGCTCCAAAAATGTGA
AGAAAAGTCTCACCGCCTACAAGTCGCTGAAATACGCGGATGAGGGTGTC
GATGACCGCACTGTCAATGATGAGTATCACTATGCCGGATGCGAGGATCC
GAAAATAATGCTGACCACCTCGCACAACCCTTCGTCGAGATTGAAAATGT
TCATGAAGGAACTGCGGCTGATTATCCCAAATGCGCAGCAGATGAACAGA
GGAAACTACCAGCTGACTACACTAATGCACGCCTGTCGTGCCAATAATGT
AACCGATTTCCTAATTGTCCATGAGCATCGTGGCATCCCGGACAGCCTTG
TGGTCTGTCATCTTCCGTACGGGCCAACTGCCTTCTTCAACATATCCGAT
GTGGTTATGCGACATGATATACCCGACATTGGACACATGAGCGAGCAGAA
GCCACACTTAATTTTTAATAACTTTAAAACGCCCATTGGCCTGAGAACTG
TTAAGATACTCAAACACTTGTTCCCAGTGCCCAAGGAGAACTCCCAAAGA
GTTATGTCTTTCCTAAACCACAATGACTCGATTATATTCAGACATCATCA
GTACAAATATGTGAACAAGGAGTTGGAGCTTACCGAAGTGGGCCCCAGAT
TCTCACTGAAGCTGTACCAAATTAAGCTCGGCACTTTGGAGAACATCAAG
GCAGCTGACACGGAATGGATTAACCGACCTTATATGAATACCTCGCAGAA
GAGGCTCATATTTTCTAACGATCCGGGCATAATAAATAAAGACACCGAGG
CTGCAAGCTTTCTAGACCAT
FMO08527.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11920-RA | 1012 | CG11920-RA | 61..954 | 9..902 | 4455 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25075617..25076324 | 195..902 | 3525 | 99.9 | Plus |
| 3R | 32079331 | 3R | 25074937..25075125 | 9..197 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:08:35 has no hits.
FMO08527.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:38:08 Download gff for
FMO08527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11920-RA | 56..956 | 9..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:20 Download gff for
FMO08527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11920-RA | 61..961 | 9..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:34 Download gff for
FMO08527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11920-RA | 61..961 | 9..911 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:34 Download gff for
FMO08527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25074937..25075123 | 9..195 | 100 | -> | Plus |
| 3R | 25075618..25076323 | 196..901 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:20 Download gff for
FMO08527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20900659..20900845 | 9..195 | 100 | -> | Plus |
| arm_3R | 20901340..20902045 | 196..901 | 99 | -> | Plus |
