FMO08536.5prime Sequence
982 bp (944 high quality bases) assembled on 2010-06-10
> FMO08536.5prime
CAGTCGACATGCGAGCTAACTCGACGAGATCCTTATCCTGGCACATCCTG
CTCGGACTTTGCCTATGTCTCCTGCAGAACCTCCACCCATCACTTGGCCA
AGATGCAGTGCATCCTAGCGAAGACTTGAACCCAAGCACTGGTCGTAGTC
AGTCGGCGAATAGTGTATCATACTTTAAGGCGTCCATTCCAATGAGAATC
TACGAGTGTCTGCGGGAGTTCACCATGCTACACTGCACGAAATTGTACGT
TCTGCAGAAAATGGAGGAGCGCCGCCAGATGCCAAACAGTGGAAATCTCA
CCCGCGACTTTGTGGATCAGTTCTTCGGGGACGAGACACAGATGGGCAGC
CTGGTGGGCAAGAAGTACCACAAAATGTCCGAAAAGGAGCTCAACCAGCG
GCTGGTTGTTAATTTTCAGCGATTCTTTAAGCATCGTGATCTCAAGATGC
ATATCCTGCCCGGAATGCTGGTGAAGATTGTGCCCAGCAAGGACAACAAA
CTGAAGTTCTCGATCAAGAAGGCACCCAAATCCCGGATGGGTCGTTCCCG
AAGACGTGAGACCGAAGAAATGGACCTGCCCCTTATTAATATTCCGTCCA
TCGGTGGGGGTGGTGCCAATAGTGGAAGTGTGGAGACCTACGAACCGGAA
GCGGAAGGAGATTCCAAGCAGCATGGGCTATTGGGGGGCGGAGGAGGCGT
GGCCGGTGGCGAGGGGGGCGGCGGATGCATTCTGGGCAAGCGCAAGAAAA
AGAACTCGTACAATGTGACCATGATGCACGTGGCGGTGCCCATGCTGATC
TTCCCCGTCGTCCTGCTTGGCAGTCTCCTGCCCTTCATCCTGCCCGCCCT
TAAGATGGCCACCATCCTGTCGCTGGTGATGACAATGGCGCCTTTATGGC
AGCTTTACTGTATGCCGCCCGTACCCAATTCACACACAAGATGTAGCAGC
ACATCAGCTACAGTGCCAGCTTTCTAGAACAT
FMO08536.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15888-RB | 1100 | CG15888-RB | 39..995 | 9..964 | 4595 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13285978..13286491 | 522..9 | 2570 | 100 | Minus |
| 3R | 32079331 | 3R | 13285051..13285494 | 964..522 | 1960 | 96.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:17:34 has no hits.
FMO08536.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:38:10 Download gff for
FMO08536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15888-RB | 39..1000 | 9..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:40 Download gff for
FMO08536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15888-RB | 39..1000 | 9..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:04 Download gff for
FMO08536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15888-RB | 39..1000 | 9..971 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:04 Download gff for
FMO08536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13285046..13285493 | 523..971 | 96 | <- | Minus |
| 3R | 13285978..13286491 | 9..522 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:40 Download gff for
FMO08536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9110768..9111215 | 523..971 | 96 | <- | Minus |
| arm_3R | 9111700..9112213 | 9..522 | 100 | | Minus |
