FMO08543.5prime Sequence
281 bp (281 high quality bases) assembled on 2010-06-10
> FMO08543.5prime
CAGTCGACATGTCATCGCAGTTTCGTGAGAAGCGCGGATTAGCTAGCAGT
GCCAATAATGAACTGCCCACCATGGATCCCAACGAGAGTGACTTCGCTCT
GGAGCTGAAGCCAGCACCCAAACAGACCTGCATTCCGACGCACCAACGCC
AGAGATTGGCCAGCTCGGACACCAACGTCTATCAGCGTGAGAGCGTGTTT
GATATACCGGACAAGTCCTGGTCAGTCCTGTACTTTGGATCCGGCAAGGA
CAGTTCCTCGAAAGCAAGCTTTCTAGACCAT
FMO08543.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32440-RA | 633 | CG32440-RA | 185..440 | 8..263 | 1280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21360363..21360530 | 8..175 | 840 | 100 | Plus |
3L | 28110227 | 3L | 21360949..21361036 | 176..263 | 440 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:20:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 2352..2482 | 132..255 | 115 | 58.8 | Plus |
FMO08543.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:36:11 Download gff for
FMO08543.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32440-RA | 185..453 | 8..277 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:38 Download gff for
FMO08543.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32440-RA | 185..453 | 8..277 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:37 Download gff for
FMO08543.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32440-RA | 185..453 | 8..277 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:37 Download gff for
FMO08543.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21360363..21360530 | 8..175 | 100 | -> | Plus |
3L | 21360949..21361049 | 176..277 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:38 Download gff for
FMO08543.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21353463..21353630 | 8..175 | 100 | -> | Plus |
arm_3L | 21354049..21354149 | 176..277 | 95 | | Plus |