FMO08547.5prime Sequence
692 bp (-88 high quality bases) assembled on 2010-06-10
> FMO08547.5prime
CAGTCGACATGGCCCCCAACGATCCATCGCATCCTGGTGGAAAGTCAACC
GCCGTGGCGATGGCCACCAGCCACACCATCTCATACGTGCAATGCCAGAA
CCTCAAATACAACGTCATTATCCTCGGCTGGCTGGGCGTGATCATCTCCA
CCGTCATCTTGGGCAGCTCGGCGCTGACCATCCACTTTCGTCCGGACATC
GAGCTGCTGCTAAACCAGTGGCCCATGAACTTGGTCCCGGTCGCAGAACA
GCAGCTACTGATCAATTTGTTGACCATCTTTAGCTCCATTGTGTACGGAC
TGTCGCTGATCAACATGGGCGTCAGTCTGCTGCTGCTGATTGGTATTGCC
CGGGACTCAAGCTGCCTAATTTATCCTTGGCTGATCTATCATGGCGTTAT
TTTTGGCTTTGGTCTTTACTTGGGGGTTTTCTACGCGACCGCAGGTCTGT
TCATTGACCTGTCAAGCTTTCTAATGTGTCTTCTGGTGTTCAACCTTGTG
CTGGTTATATTTTATAAGATCTATCACGAGGTCTTCACCCTATTTCGCGT
GATGGAGCAGCTGTCGAAGGATGGCGGAATGGACGGACTCTACTACCAGG
ATGCGGAGCATGGATGGACTGCGGCTGGAGTTCCCTTTCAACATGTCTAT
GTGCCGCGTCTGCCGATGCAAAAGGCAAGCTTTCTAGACCAT
FMO08547.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13747-RA | 979 | CG13747-RA | 151..818 | 7..674 | 3295 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9017965..9018225 | 7..267 | 1305 | 100 | Plus |
| 2R | 25286936 | 2R | 9018701..9018871 | 504..674 | 825 | 98.8 | Plus |
| 2R | 25286936 | 2R | 9018497..9018648 | 353..504 | 745 | 99.3 | Plus |
| 2R | 25286936 | 2R | 9018290..9018376 | 268..354 | 435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:21:12 has no hits.
FMO08547.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:36:22 Download gff for
FMO08547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13747-RA | 106..781 | 1..678 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:47 Download gff for
FMO08547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13747-RA | 146..821 | 1..678 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:45 Download gff for
FMO08547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13747-RA | 146..821 | 1..678 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:45 Download gff for
FMO08547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9017960..9018225 | 1..267 | 98 | -> | Plus |
| 2R | 9018290..9018375 | 268..353 | 100 | -> | Plus |
| 2R | 9018498..9018648 | 354..504 | 99 | -> | Plus |
| 2R | 9018702..9018874 | 505..678 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:47 Download gff for
FMO08547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4905465..4905730 | 1..267 | 98 | -> | Plus |
| arm_2R | 4905795..4905880 | 268..353 | 100 | -> | Plus |
| arm_2R | 4906003..4906153 | 354..504 | 99 | -> | Plus |
| arm_2R | 4906207..4906379 | 505..678 | 97 | | Plus |
