FMO08549.5prime Sequence
812 bp (638 high quality bases) assembled on 2010-06-10
> FMO08549.5prime
CAGTCGACATGACCATAATGGCTATATCAGACGACTCATTTGAAAATGAA
CAGCAGGTGGCGGTAAGGCAAGAAGCACCCAATGCCATTGGTAACATCCC
GGATGTGGTGGAGTCGGCTTCCCGCCCACAAAAATACACGTTCCATGAGA
TCTATCAGATGATTACAGCCCTCACCTGGCCCCGAATTCTGTTTGATTTG
CTCGTGCGCCACGAGTGGAACTCCATCTTTTTGAGCCTAGGCTTTCTTAT
CCTCAATGCCTTCGAGGTCCTTCAAAGCTTCAATCTGTTGCAACAGCTGG
CTGTAGTCGGCATGATGATCCTGAGCAACATAATGATCTACAAGGCCATC
CGGCCGTATGTGCGATTCCATCTTTACGAGCGTCTGATCCGCGCCGATTT
CAATGTGCACATCACCCATGAAATGGTTGTGCGCGTGGTCTACTGTGTAA
ATCGCTGCTTGGTCACGCTGCATTGCATCCTCTTTCAAACTGAAATCTTC
GAGCTCTTTTTGATGATGCTTGCCCTGGAAGCAGTGCGTAACATCATCTG
GTATACTAACATCTTCTTGCTAATTAAGATCGTCTTATGTGTGACGTTGT
TTTTTCCAAGGCTTTTCTATAATGATATTGATAATGCGTCGAGCAGAGCC
TATTATCATATATGTGTGCTGCAGATCGTTGACAAGCTTGAGGAGATAGG
CGTGGAGGTGCATCTAGGCATCATTGAACGCTGGAGCATGAAGTGGATGC
CATGATGGAGTTGTATTACGAGATTGAGGACTGGCCAAACAAAGGCAAGC
TTTCTAGACCAT
FMO08549.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14579-RA | 1156 | CG14579-RA | 131..917 | 9..794 | 3730 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21193383..21193956 | 9..582 | 2780 | 99 | Plus |
| X | 23542271 | X | 21194069..21194282 | 582..794 | 930 | 96.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:11:05 has no hits.
FMO08549.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:47 Download gff for
FMO08549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14579-RA | 122..926 | 2..804 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:33 Download gff for
FMO08549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14579-RA | 122..926 | 2..804 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:25 Download gff for
FMO08549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14579-RA | 122..926 | 2..804 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:25 Download gff for
FMO08549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21193374..21193956 | 2..582 | 98 | -> | Plus |
| X | 21194070..21194291 | 583..804 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:33 Download gff for
FMO08549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21064401..21064983 | 2..582 | 98 | -> | Plus |
| arm_X | 21065097..21065318 | 583..804 | 95 | | Plus |
