FMO08550.5prime Sequence
872 bp (872 high quality bases) assembled on 2010-06-10
> FMO08550.5prime
CAGTCGACATGTCTAAGAATCCACTTCGATTGTTCATAAAACCTGTAATT
CTTCGCCGCCTGTCTGATAAGCCCAAGTTGAGCAACAAGCCATCGAACAC
CCCTCGCCCACCAAAGGATCCACCGGATGAGGGCTACCAACCGACCAGTG
TCGATCACAATGGGATCGATGTGCCGCCGTTTGTGAGACCCTCTTCCTTC
CGCCAGTTCAGTGGACCGGATGAGAAGCTGGGACCAGGAGCAGGCAAAGC
GCTGCCCTACAAGAACCCAACTTACTTTGGCTATCATCGATTCTCATTTA
TGGAACTCACGGTCACGGCTGTGGAGTTACGAGACGAACGTCGATTGGAC
GGAGGACTACAGGCATCCATCGAAGCCGACGAAGAATCCGAGTGTGGCGA
GGCCCAACTGGAGACCATGAAGAAGCTGGAAAGCGAGTGCGATGCGATAC
TCTCCAACCAAGCCAAGAAAATCCAGAAGGCCAAATCTTCGGCCGAGGAG
AAGTGTCTCCAGGAGATGAGTGAGGAGGAGCTAAAGGAGTGGTGCAAGAA
AAAGGAGGAGGACATCAAAAAGAAGGAGCAGGAAAAGAAGGAGGCCAAGT
CCTCGCCCAAGGAGAAGAAAATCCAGGACATGAGCGAGGAGGAACTGAAG
GCTTGGTGCCAGAAAAAGGAAGAGGACATCAAAAAGAAGGAGCAGGAAAA
GAAGGAGGCCAAGTCCTCGCCCAAGGAGAAGAAAGTCCAGGACATGAGCG
AGGATGAACTGAAAGCTTGGTGCCAAAAGAAGAAGAAGACATCAAAAAGA
AGGAGCAACAAAAGAAGGAGGAAGGAAAGTGTGAAGGCGATGACAACAAA
AGGATGCAGCTTTCTAGACCAT
FMO08550.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11815-RA | 1010 | CG11815-RA | 71..914 | 9..851 | 4195 | 99.9 | Plus |
| CG11815-RA | 1010 | CG11815-RA | 654..884 | 478..708 | 795 | 89.6 | Plus |
| CG11815-RA | 1010 | CG11815-RA | 540..770 | 592..821 | 770 | 89.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1970287..1971130 | 851..9 | 4170 | 99.9 | Minus |
| 3L | 28110227 | 3L | 1970317..1970547 | 708..478 | 795 | 89.6 | Minus |
| 3L | 28110227 | 3L | 1970431..1970661 | 821..592 | 745 | 89.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:10:57 has no hits.
FMO08550.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:46 Download gff for
FMO08550.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11815-RA | 1..852 | 9..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:31 Download gff for
FMO08550.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11815-RA | 71..919 | 9..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:23 Download gff for
FMO08550.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11815-RA | 71..919 | 9..855 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:23 Download gff for
FMO08550.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1970282..1971130 | 9..855 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:31 Download gff for
FMO08550.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1970282..1971130 | 9..855 | 99 | | Minus |
