FMO08553.5prime Sequence
862 bp (862 high quality bases) assembled on 2010-06-10
> FMO08553.5prime
CAGTCGACATGGCCCTGGAAAGTATTTGTGGTATGGATAAGCTGCCATTT
ATGAAGAGCTTTGGATATCGCACCTCGAAGCAGACAATTGAAGAAATCAG
AGTCGCATCTAGTAACATGGATAATCCCCTCGCCATAATGGCTCCGCCAT
ATGAAAATCCACGGGAAAGTGTGAAAAAACTGAATGCGCTAAGTGAAGTG
CAGATAGATTTTGACCACGGAACCACCACGGTGGGTTTTGTTTACCAAGG
TGGCATCATTTTGTGTGTGGATTCCAGAGCCACGTCGGGAAAGTTAATTG
GATCTCAGAGCATACATAAGGTCGTACAGGTCAACCAGTACATAATGGGT
ACCACTGCAGGTGGTGCAGCGGATTGCACATACTGGGATCGAGCTTTGAC
CAGGGAGTGCCGACTGCACGAGCTCCGCTATAAGGAGCGACTTCCAGTCC
AATCTGCTGCCAAATATATCTCCAACGTGGCTGCGGAATACAAGGGAATG
GGTCTCTGCATGGGAATGATGCTGGCCGGTTGGTCGCCCGAAGGACCCAG
TTTGGTATACGTGGACTCCAACGGCCTGCGGATCCATGGAAAGCTTTTCG
CCGTGGGCAGTGGAGCCCCCAATGCCCTGGGAATTTTGGACTCTGACTAC
CGGTTGGATCTCAGTGATAACGAGGCCTACGACCTGGCCTTCCTTGCAGT
ATATCATGCTACCATGACAGATATCTTTTCAGGCGGTGTGGTGAGACTAT
ATCACATGGATCAAGGAAACTGGAGGAATGTGGCCAATAAAGACTGCCAG
GAACTGCATGAACAGTACTCAGTGTGGGAAATCAACAAACTCCCGCAAGC
TTTCTAGACCAT
FMO08553.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta5R2-RB | 1534 | CG31742-RB | 80..918 | 7..844 | 4155 | 99.8 | Plus |
| Prosbeta5R2-RA | 1082 | CG31742-RA | 80..918 | 7..844 | 4155 | 99.8 | Plus |
| Prosbeta5R1-RA | 1107 | CG9868-RA | 564..769 | 484..689 | 190 | 75.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17990497..17991335 | 7..844 | 4130 | 99.8 | Plus |
| 2R | 25286936 | 2R | 10820618..10820663 | 486..531 | 185 | 93.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:38:24 has no hits.
FMO08553.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:39 Download gff for
FMO08553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31742-RA | 73..926 | 1..855 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:55 Download gff for
FMO08553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta5R2-RA | 73..926 | 1..855 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:37 Download gff for
FMO08553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta5R2-RA | 73..926 | 1..855 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:37 Download gff for
FMO08553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17990490..17991338 | 1..849 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:55 Download gff for
FMO08553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17990490..17991338 | 1..849 | 98 | -> | Plus |
