Clone FMO08554 Report

Search the DGRC for FMO08554

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:85
Well:54
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14826-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08554.5prime Sequence

545 bp (545 high quality bases) assembled on 2010-06-10

> FMO08554.5prime
CAGTCGACATGAAGTGGACAACGGGTCTGCTCTTGGCGGTGGCCATGCTC
AGCCTGCCATCTCGGGGAGATTCATCCCGAAATCTCACGGAATTCATGGG
ACATCGACAGAAGCGCTGGCTGATCTACCAGAATAGTGGGTCTTTGAAGT
TTAGTATTGGTCCCTCGATGCCCATACCCTTGGGGGACAAGGTGACCTTC
CGTTCCTGTGTGCTCTCCTACACGCTCCAAGGTGGTTCCTATTCCCTGCC
CACATCACCCATCTGGCCGTGGGATAAGTGGGAAGGCACCTTCGCTCGTT
CCTTGATGCAAATGCGAAGGAATATTGAGCGCCATGTGGCCAATGGCGGA
GTGCGATATGCGGACGATGCCAGGCTCTTGGTCTACACTGCACTGGAGGA
GTATATGGGCAGGAGGAACAATGACCGCTCCATGGGCAGACAATGTCTGC
TGCGCTCCATATGCGAGAATGCTCAGATCCATCATCATATCGGTGTGTTC
TCGGAAATTATGGATATTGTACTCAGGGCAAGCTTTCTAGACCAT

FMO08554.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14826-RC 1074 CG14826-RC 21..539 8..526 2595 100 Plus
CG14826-RA 1022 CG14826-RA 272..790 8..526 2595 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7234783..7235302 8..527 2600 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:12:39 has no hits.

FMO08554.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:37 Download gff for FMO08554.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14826-RB 272..794 8..531 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:32 Download gff for FMO08554.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14826-RA 272..797 8..533 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:41 Download gff for FMO08554.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14826-RA 272..797 8..533 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:41 Download gff for FMO08554.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 7234783..7235305 8..531 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:32 Download gff for FMO08554.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7227883..7228405 8..531 99   Plus