FMO08559.5prime Sequence
761 bp (761 high quality bases) assembled on 2010-06-10
> FMO08559.5prime
CAGTCGACATGCTGCTCAAAGGCATTCTTCTATTAGTTTCCATTGCTCAA
ATAGCAGCAGATTTCAAATCGATTGGCATTGAACAAGCTCCCTGGCAGGC
TTCCGTTCAAATAAACGACAAACATCACTGCGGAGGAGTGATATACAGCG
AAGATATCATCCTGACCATTGCCGAGTGTGTGAGAAAGGCCAGATTGGAA
TTCATCTCGGTGCGAGTGGGGTCTGCCCAGGAAAACGCCGGTGGCACTGT
GCTGAAGGTCGAGAAGATGAGGCTGCAAGTACTTGGCCTGCGTCCCAGTG
ATGTGGCCATACTCCAGCTGAGATCGCCGCTGTACTTGGACGGCGGAATT
CGGGCCATTCCCTTGGCCACCATACCATTAGTGCCGGGAACGAATGCCTC
CGTTTCGGGTTGGGGTCAACTCTCTGCCATGAATCCTTCGTCGGAAGTTT
TACTGAGAGTCGATGTAAAAATCCAAGATCAATTGATGTGCGCGACAAAC
CTTGCTCTGAAGGGCAGACTTATGAGTGTGGGCGAGATCTGCGCAGCACC
TGCGGGAGAAATTCCCTACGCCTGTCAAGGATTCGTCGGCGGTCCTTTGG
TTGCCAATAATCGGCTGTATGGAATCCTTTCCTGGCAAAGTGCCTGCGAC
GTCCTCAATAAATCTAGTGTCTATGCCAATATCGCGATGTTCAAAGTGTG
GATTGAATCCACTGTTAAGCTAATGAATTTCTTCAGAATAGGCGCAAGCT
TTCTAGACCAT
FMO08559.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17242-RA | 842 | CG17242-RA | 48..782 | 9..743 | 3675 | 100 | Plus |
| CG17242-RB | 1035 | CG17242-RB | 48..782 | 9..743 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2268359..2269093 | 743..9 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:57:25 has no hits.
FMO08559.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:52 Download gff for
FMO08559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RA | 1..738 | 9..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:55 Download gff for
FMO08559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RB | 20..769 | 1..752 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:04 Download gff for
FMO08559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RB | 41..790 | 1..752 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:04 Download gff for
FMO08559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2268350..2269100 | 1..752 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:55 Download gff for
FMO08559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2268350..2269100 | 1..752 | 98 | | Minus |
