FMO08563.5prime Sequence
662 bp (662 high quality bases) assembled on 2010-06-10
> FMO08563.5prime
CAGTCGACATGGCAGAAAAAAATAGTTCGAACGATGGACAGTACTTCCTT
CAATCGAAACATTTTATCGATTTTAGACAGAACGAAACGGACACAGTGGA
TTCGGCTATGGATGTAGCTACCAGGCAAAGTGCATCCACCAAAAAGAAGA
TACATATCCACCAAGGACTAGGATCTAGAAAAACGTCAAAGAATATTAAA
CGGAAAATGTCGAAAGCTAGTCAAGACCTGAAAAGAACTTCTAAAACTGC
CGCGAAACCACAGAAGCAAAGGTTATCACAGAGTTTTAAAAAAAGAAATA
TTCCGGAAAAAAAATTTGACAAGTTCCCGCAGGCGGGAGTTTCCCGAAAG
CAGGATGGCAAATTCCGAACCATAACTATCAAAAAGGAAGCACAATGTCG
TCTGCGAACTGCCTTAAAATTACTGGATATCCTTGAAGGGAAATATGATG
ACAGTGATAGAGAATGTTCGTTGGATTCTAAATCCTTACATGGTTCAGTA
AAAAGAAATACCCGTCGATTGCAGACTATGCAGGATCTCCCACCCAGGGA
TTTCTTTGGTCTTTGCAGGGATTGCCGATCACGATGCAGAAATTGTGGCA
GACGTCCTTCGGCTGTCCTTATGGCAAGACGTAAAAGATATTCAGCAAGC
TTTCTAGACCAT
FMO08563.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31804-RA | 856 | CG31804-RA | 102..737 | 9..644 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17363597..17364232 | 9..644 | 3180 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:27:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jockey | 5020 | jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5). | 4327..4376 | 612..661 | 106 | 68 | Plus |
FMO08563.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:23 Download gff for
FMO08563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31804-RA | 103..741 | 9..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:24:46 Download gff for
FMO08563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31804-RA | 102..741 | 9..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:01 Download gff for
FMO08563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31804-RA | 102..741 | 9..649 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:01 Download gff for
FMO08563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17363597..17364236 | 9..649 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:24:46 Download gff for
FMO08563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17363597..17364236 | 9..649 | 99 | | Plus |
