FMO08565.5prime Sequence
584 bp (584 high quality bases) assembled on 2010-06-10
> FMO08565.5prime
CAGTCGACATGATCATGTTGGAGGCCACCTTGCAGCCAGGATATGTGCCT
GTTGGCATCACGCCAATCTTGAATTGGACAGAGCCACCAAGTCTAAAGCA
TTGTGATGAGGATTATCTGATCGTTGTCCTGGCATTGTCCATTTGCACCC
AGTTCTTGCTGATGACCTATGTGGCGTTCGCAGTCATGCAACCGTGTTCC
ATGCGAAGGAAGCAGTTGATTGAGGGCCAGCAAAAGACCTTCGCTAGCTT
CATATTCCGAAGGTTACTCTTCCAGTTGGACGAGGCATTACACCCTTCGG
TCGAGGCGGTGCGGTTAGACTCCTGCTTGAGGTCTGGTGAAAAGCTAATC
CAGGCCATTCAACTGTTCCGGCGAGATGCTCTCAAGGTCCTTCAGCCAGT
GCAGAATATCTCATCCGCAATGGCCAGCGATTTGTACTATGTGCTGGACG
AGGAGGAGAATGAACTGAATTTCAACGGCTATGGGAGCTCTCATTCAAAG
GTCGAGGTCACCGAGGAACTATTGGTGTATTTGCTATATCCGGAACGAAA
AGTGTCCGAGAAGAAGGCAAGCTTTCTAGACCAT
FMO08565.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15711-RB | 2345 | CG15711-RB | 1692..2249 | 9..566 | 2790 | 100 | Plus |
| CG15711-RA | 757 | CG15711-RA | 104..661 | 9..566 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16363647..16364204 | 566..9 | 2790 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:36:01 has no hits.
FMO08565.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:18 Download gff for
FMO08565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15711-RA | 98..664 | 1..570 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:17 Download gff for
FMO08565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15711-RA | 98..664 | 1..570 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:03 Download gff for
FMO08565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15711-RA | 98..664 | 1..570 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:03 Download gff for
FMO08565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16363644..16364208 | 1..570 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:17 Download gff for
FMO08565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12251149..12251713 | 1..570 | 98 | | Minus |
