FMO08577.5prime Sequence
990 bp (990 high quality bases) assembled on 2010-06-10
> FMO08577.5prime
CAGTCGACATGAAATCAGAAACTGAGACTCTGCTCTTGCAAAATGCTGTT
CCTATAATAGATTTAGAAAATACCATCGAGGACGTGGCGACAAATCTGAG
AGAGGCTTTATCTGAAAAGGGGTATGCTCTGCTAATAAACCACGGTATTT
CAAATGAGAAGATTAAAAAAGCTTGGAAGTATTTCGATGGCTTTGTCGAC
CTGACCGATGAAGTTAAATTGGCATTTGAGAGAAGCAAAGCTCCAGATGG
CGAAAATCATGGTTACGTGAGTCCAGGAATGGAGCGATTTGATGGCAGGA
CACCGGAGCTGCGCCATGCTTACAATATATGCAAGCTGCAGGATAAATTT
CTGCCTGAACAGCAGCTACCAGGATTTAGCAGGCACATTAACTCCTTAGT
CGATGACTTCAATGAATTGGGTAGGTTTATTCTTAAGGCTCTGGCAATTT
CATTGGATGCTCCACCTTCGTTCTTCACGGATAAACATTCGTTTATGCTG
TCCGACGATCGCTTTAATCTGACCACCCTACGGATGCTGTTTTACCCGCC
CGTGGAAGATCAGGATCATGGAAGAAGCTTCATACGATGTGGAGCCCATG
CCGACTACTGCACCTTTACTCTGTTGGCTCAAGATTCGGAGGGTGGATTG
GAGGTCAAACTGCGGGGCAGTGACAAGTGGGAGCGAGTGGGTCATCTGCC
ATGAGCACTCTTCATAAACTGCGGTGAAACCATGGCTATCTGGACAGATC
AGTTCTACCACGCTTTGCAACATAGAGTAGTGATTCCCGATCAGGTTGAT
ATTCGCCATCGAGGCCGGCACTCCATTGCCTATTTCTGTCATCCTGATAA
CTCTGCACTGATTAATCCAAAGATTTAAATATTACAACTAAGCAGACGAC
AAGTGACGTATACAAACGCATATGATATAACTATGGCTCTGGCAAAAAGG
CGCATTTGCCACATCATATTTCTGCAGCTTTCTAAAACAT
FMO08577.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33093-RA | 1055 | CG33093-RA | 40..999 | 9..967 | 4655 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22531071..22531678 | 767..160 | 3010 | 99.7 | Minus |
3R | 32079331 | 3R | 22531731..22531883 | 161..9 | 765 | 100 | Minus |
3R | 32079331 | 3R | 22530871..22531014 | 909..767 | 670 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:27:40 has no hits.
FMO08577.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:04 Download gff for
FMO08577.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33093-RA | 40..1009 | 9..978 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:24:31 Download gff for
FMO08577.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33093-RA | 40..1009 | 9..978 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:12:49 Download gff for
FMO08577.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33093-RA | 40..1009 | 9..978 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:12:49 Download gff for
FMO08577.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22530871..22531013 | 768..909 | 99 | <- | Minus |
3R | 22531071..22531676 | 162..767 | 99 | <- | Minus |
3R | 22531731..22531883 | 9..161 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:24:31 Download gff for
FMO08577.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18356593..18356735 | 768..909 | 99 | <- | Minus |
arm_3R | 18356793..18357398 | 162..767 | 99 | <- | Minus |
arm_3R | 18357453..18357605 | 9..161 | 100 | | Minus |