FMO08578.5prime Sequence
521 bp (521 high quality bases) assembled on 2010-06-10
> FMO08578.5prime
CAGTCGACATGCCTCCTGTTGAAGTGAGCATACGCCAAGGAGTTGCGTTT
TTGGGCTTGTATGTGCTGCTCCTGGCTGCTTTGGTGCGTCCCCAGATGAA
CTTCAGCATATTCGTGGACTCGTTCTTCCTGCAGGTCAATCACTCGGTGG
TAATGGTGCTGAGCTACCGGTTTGATTCCTATATGGCGATGGCCGCCGCA
CCACTCAGTGCCGTTACGGTGTTTGCCCTTTCCAAGTGGAACGAACGTTG
CGAGAATCCCTCCTCCAGGAAGCTAGTGATCATGGGCGTGACATGCTTGT
ATGTCTTGGTGCTGGTGGCCAATGTCCTGGCCAATGGAATAGTGGTTCAG
CAGGCGTTGATCCGCTTCGATCAATGTCCGTATCGGGCGTGGTATATGTA
CAGCCAGATGGCCATGTCCTTTATCAAATCCTCGATTGCAGAAGTCCAGG
AAGTTTTCACCGGACGGCCTCAACGTCGGTCCCGACTTATATATCGTTTG
CATGCAAGCTTTCTAGACCAT
FMO08578.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5388-RB | 1324 | CG5388-RB | 155..649 | 9..503 | 2475 | 100 | Plus |
CG5388-RA | 741 | CG5388-RA | 155..649 | 9..503 | 2475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22337125..22337619 | 503..9 | 2475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:27:34 has no hits.
FMO08578.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:02 Download gff for
FMO08578.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5388-RA | 142..647 | 1..504 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:24:26 Download gff for
FMO08578.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5388-RA | 147..649 | 1..503 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:12:45 Download gff for
FMO08578.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5388-RA | 147..649 | 1..503 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:12:45 Download gff for
FMO08578.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22337125..22337626 | 1..503 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:24:26 Download gff for
FMO08578.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18162847..18163348 | 1..503 | 99 | | Minus |