FMO08581.5prime Sequence
689 bp (394 high quality bases) assembled on 2010-06-10
> FMO08581.5prime
CAATCGACATGAGTGGTTCGCCATCGATGCCCCGTCGCCGCCAGATCGGG
CATACTTCCGGCCATTGTAATGTGCGCTGCGATGGCTGCGGCAACAATAG
GATGACCTTCTATCGCTACAAGTGCCTGCACTGCCTGGACTATGATCTTT
GCTCCGACTGCAAGGAAAATGGGGTCTCAAACGGGTTGCACAGTCTGGAT
CATCCGCTCCAGTGCCTAATGGATCGTGATGCACTTGAGCTGCACTTCGC
CGGTGAGCCGATTCCGATATTGTGCGCCGACAGCTTCACGTGCCCAGTGT
GCGGTGAAATGGGCTTTTCCGTATAGGATCTGAGGACGCACTGCCAAGAT
AATCATCGCATGGCGCGCACAGTTTGCATTTGCCCAGTCTGCGCGGCGGT
CCCATTGTCGCAACCGAGTCACATTGCTCACATTGCCAATCACTTGATGT
TCTCGCCATCGCATCGCGCTACAGGGGATCCGATGATCGATATCATCGCC
ACTTCCCAGGCTGAGGGCTCCAGTTTGCCCCAAAACTCTGCCGTGAGCTC
TGGATCTGGCGCTCAACACACTTTTTCCAGCTCGGAAAATTCCCAGGTGC
GCTTCCTTCTACCCGGAAACAGAACTCCCTTAGCTGATTCCGACGATTTT
AACATGGACAATTGGGAGGTAGCAAGCTTTCTAGACCAT
FMO08581.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3526-RC | 860 | CG3526-RC | 113..776 | 8..671 | 3260 | 99.4 | Plus |
| CG3526-RA | 1084 | CG3526-RA | 71..732 | 10..671 | 3250 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2893220..2893880 | 11..671 | 3245 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:21:12 has no hits.
FMO08581.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:36:57 Download gff for
FMO08581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RC | 109..779 | 1..675 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:29:08 Download gff for
FMO08581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RC | 109..779 | 1..675 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:51 Download gff for
FMO08581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RC | 109..779 | 1..675 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:51 Download gff for
FMO08581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2893213..2893883 | 1..675 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:29:08 Download gff for
FMO08581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2787246..2787916 | 1..675 | 98 | | Plus |
