FMO08582.5prime Sequence
1047 bp (1000 high quality bases) assembled on 2010-06-10
> FMO08582.5prime
CAGTCGACATGCACTCCTTTGCCATTCTGATTCTGAGCCTGGCCTCCGTG
GGCCTGGCGACGCCATTGAGTAACACCTATCTGCCGCCGAAAGTGGGCGC
CCAGAGTGGATACAGTGCAGCGGCGTCCAGTTCCTCGGGATCGTATGCAG
CTCCAGCGGCCACCTATGCCCGCAGGTCCCACTCCGTGGCAGCTCCTTCC
AGGCAGTACCTAGCTCCGGCTTCATCGCATGGTAGCTACAGCTCGGGTGG
TTCCTCCTATGCCGCTCCATCTGTGTCCCATGTCTCGTATTCCGCACCAG
CTGCATCGGCATCAGCATCCCATGTCTCGTACTCGGCGCCAGCTGCAGCC
CACAGCTCATATGCCGCCCCATCCGTATCACATGGATCGTACTCCTCTGC
TTCCCGCACCAGCTACTCAGCTCCCGTGGCTGCTCCATCCAGGAAGTACC
TGGCTCCAGCTGCAGTATCCCACAGCAGTTACTCCGCACCCGTCGTTTCC
CGCAAGAGCTATTCCGCTCCAGCCGTGTCGCATGGATCGTACTCCTCCTC
GGGAGGTTCCAGTGGCTCCTACTCAGCTCCAGTTGCATCATATAGCTCCT
ATTCCGCTCCAGCTGCCTCCCACACTAGCTATTCCGCACCAGTGGCCGCT
CCTTCCAGGCAATATCTCGCTCCGGCTGCCTCATCCTACTCCGCCCCAGC
GGTATCATCCTACTCCGCACCAGCGGTATCATCCTACTCCGCTCCAGCGG
TCTCATCCTACTCCGCGCCAGCGGTATCCCACGGATCATCGTACTCCACC
TCATCGCTATCCCATGGATCGTATGCCGCTCCATCGGTTTCCAGCAAGAC
CTATGCCGCCCCAGCTGTCTCCCATGGCAGCTACTCGGGTTCCAGCTCAG
ATCTGGCCACGGATACGGATCTGGCTCCAGCCATGGATCGGGAGTGCGTT
CTGGCCACGGATCTAGCTTCGGATCTGGACACAATCGGGTTCCTACGCTG
CCAATGATGCTACGAGTACGCCTAAGGCATGCAGCTTTCTAGACCAT
FMO08582.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11585-RB | 1165 | CG11585-RB | 52..1077 | 9..1030 | 5000 | 99.4 | Plus |
| CG11585-RB | 1165 | CG11585-RB | 724..773 | 729..778 | 205 | 94 | Plus |
| CG11585-RB | 1165 | CG11585-RB | 772..821 | 681..730 | 205 | 94 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14189644..14190655 | 11..1019 | 4895 | 99.6 | Plus |
| X | 23542271 | X | 14190314..14190384 | 705..775 | 295 | 94.4 | Plus |
| X | 23542271 | X | 14190338..14190408 | 681..751 | 295 | 94.4 | Plus |
| X | 23542271 | X | 14190314..14190363 | 729..778 | 205 | 94 | Plus |
| X | 23542271 | X | 14190362..14190411 | 681..730 | 205 | 94 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:38:13 has no hits.
FMO08582.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:13 Download gff for
FMO08582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11585-RB | 52..1081 | 9..1034 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:50 Download gff for
FMO08582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11585-RB | 52..1081 | 9..1034 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:30 Download gff for
FMO08582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11585-RB | 52..1081 | 9..1034 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:30 Download gff for
FMO08582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14189637..14190671 | 1..1034 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:50 Download gff for
FMO08582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14083670..14084704 | 1..1034 | 98 | | Plus |
