FMO08584.5prime Sequence
785 bp (785 high quality bases) assembled on 2010-06-10
> FMO08584.5prime
CAGTCGACATGGAGGGTTTCGAGTATGTGGTCAATCCTCCAGTATGGCCG
AAAGTCGGATTTCTCAGGAAAATCCATCGGGACTCGAGCGGAGACTTCTG
TAGGGACAGCTACACCAAAAATATTCCGTCGGTCGCTCCTAATACGTATG
ATGTTCCCAGACCAATGGGATTTAAGTACCCGTCAAAGGCAGGATTTTCT
GCCTTGGCCAACAAGATGCCACGATTACCAATCTTTCGAGAACTGGGATA
TCCCCCTATTGGATCCTACGCTACCGATTTTCCAGGAACTCAATACTACT
TCACTTTCAACAAGCAAACTGTGCGTGAACAAAAATGGTTGACACCCGGG
CCGTCAACCTATACGCACCACCTCAAATATCCGGACTGGGACGTGGAGAC
AGCTTTCGGATCCAAGCGCATCATCTGGCCAGCAGTGGCCGTATTTTGCA
GTCCCCAAAACATTGTCAAATGCTCGACATGTGGCGAAAAGCCAGTGGGT
GACTATTTTCACAACTTTAGCAATGACGCGGACATGTGCCGACAATGCAT
GCATGTCGAGATGGCGGCGATCAAGAAGTGCAATCTTCAGGTGACGGAGC
GGTATAGTCGGCAGCAGAAAATCAAGCAATTCGTACCGGCCAGATACTGC
GGATTCTTCCACGATCACAACCAAACTACGGCCACAATTGAACGGGATTC
GCGAAAAGTGCTGCGCCAAAAGATACGCGTGGAAAATTACTTGTATCGGC
TGAATGCAAAGATAGAAGCAAGCTTTCTAGACCAT
FMO08584.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15125-RA | 1071 | CG15125-RA | 298..1056 | 9..767 | 3795 | 100 | Plus |
| CG15125-RB | 886 | CG15125-RB | 119..871 | 15..767 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19659166..19659584 | 349..767 | 2095 | 100 | Plus |
| 2R | 25286936 | 2R | 19658909..19659084 | 175..350 | 880 | 100 | Plus |
| 2R | 25286936 | 2R | 19658660..19658821 | 15..176 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:10:23 has no hits.
FMO08584.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:37:12 Download gff for
FMO08584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15125-RA | 84..849 | 1..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:25 Download gff for
FMO08584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15125-RA | 294..1063 | 1..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:08 Download gff for
FMO08584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15125-RA | 294..1063 | 1..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:08 Download gff for
FMO08584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19658656..19658821 | 10..176 | 98 | -> | Plus |
| 2R | 19658911..19659083 | 177..349 | 100 | -> | Plus |
| 2R | 19659167..19659591 | 350..774 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:25 Download gff for
FMO08584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15546161..15546326 | 10..176 | 98 | -> | Plus |
| arm_2R | 15546416..15546588 | 177..349 | 100 | -> | Plus |
| arm_2R | 15546672..15547096 | 350..774 | 99 | | Plus |
