FMO08586.5prime Sequence
881 bp (-87 high quality bases) assembled on 2010-06-10
> FMO08586.5prime
CAATCGACATGACGACTAAAAGAACAAGGGTCGATTAAATGAACCTGGGA
GTACCCGTTCACTCGGACCCCTATGAAGTGGAAAATGAATCGGCCTCGTC
AATAAAAAGAGAAACCGGCGAGAAGGTCATGTCTCATAAGGAGCTAATGG
AAAAACTGCATAAGGAGGTGAAGCTCACGACGCCGGACTTCTTCGCCCAT
GATCCATCCTGCAGCTCGGACGACTCCGAAGATTTCGAATTCCTGGAGAC
TATCAAAGAGCGAGCCAGACGCATATCCTTCGTACGACGCCGAAAGCTGC
ACTACACTGAGTTCTCAACGGTCGAGTTGGCCAGGCGTCTGATCCGCGAG
GAGTTCACAGAGTCATCGGACAGTCAACTAAGCGTGGATGATGAACATAT
CTCCGAGATCGCCGAAGAGGAGTGTCCGCCCTGCGGCACAGACTCCGACG
ACTTACTTCCGTACTTCCAATACGATCGGGCTACAGACCAATCGATGATT
TCCGACGACAGTCTGCCAAAGGAGGATCCCGAGCCCGGATTCCATCCCGC
CCATCATTGCTATAATAGGCTTATAAGCCAGACTCCTGATCCGCCGATAG
TGTACGTTCCCGCGGAACCAGAACCGCAACCGGAACCGCAACCGGAGCCG
CCAGTGGAACCGCGACCGGAACCGGAACCAGAACCAGAACCGGAAACAGT
ACTACCACCAACTGCTCCGGAAGTCATTGATAAAACAGCTCCAGAAGATG
AATACACACTATGGTTCTTGACCGTGGCGAAATATTGACCTAAAGATTTG
AGCGCCATACAGAAAACATAGGTTCGAGTGTGAAAAACATACTGGTCAAA
AACGCGAAATTTAGCAAGCTTTCTAGACCAT
FMO08586.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12620-RB | 1546 | CG12620-RB | 84..945 | 8..863 | 4010 | 98.1 | Plus |
| CG12620-RA | 1184 | CG12620-RA | 84..945 | 8..863 | 4010 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17087724..17088585 | 8..863 | 3860 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:42:20 has no hits.
FMO08586.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:36:49 Download gff for
FMO08586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12620-RA | 80..952 | 1..871 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:22 Download gff for
FMO08586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12620-RA | 80..952 | 1..871 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:32 Download gff for
FMO08586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12620-RA | 80..952 | 1..871 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:32 Download gff for
FMO08586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17087720..17088584 | 1..862 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:22 Download gff for
FMO08586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17087720..17088584 | 1..862 | 97 | <- | Plus |
