FMO08587.5prime Sequence
966 bp (966 high quality bases) assembled on 2010-06-10
> FMO08587.5prime
CAGTCGACATGGCATCTGGGTTCGTGAACAATAAGCGCAAGCGGGATGAA
GCGCACAATCAGTTCATCTGTCCCATTGTCTACACAAATGAGTTGCCCAC
TTATCCAAAGGATTGCAAGTTTCTGCCCTGTGGCCAGAATATCCAGGAGT
ACTGCAAGGAGCCGGTTTCGATTCCCAAACTGGACACTTGTTTTTCGCTA
AATTTCAAAGGACTTCATGAGCTATTCTCCGTTAATTTGATGGATCAGTC
GGCTTACGATAAGCTTTCCGAGAATGTGCAGCCAATGAATCCCAGAGAAG
CTGATCTACTTAAGGACATAAGAGCCCTAGACTGGGACTTCGCCAGACTC
GAACCAAGTCGCGCTCAGGAATGCGCCAAGATGTTCGCCAAGGAGCGAGT
GCATCCACCTCTCCCAGGACTACAGCGTTCTGTGGCGGTGCCCAAGGCCC
CAAAAGACCTGCAGCCGGTCAGCCTGGAGCAACAAAAGGCGATGATTGAT
GCGAGCTTCAAGGATATTGGCAAACCCCTCTACCGACATCCCACCAATCC
GGGTAGCAATGCCTACCCTGTGCAGGTCTTGCCAGTCTTTCCCGATACGG
ATTTGCAGAAATATAGCTTCGTCCAGATGAGTTTTGATAATCCACCCCAA
AATAGCAACCAGGGACTAATCAGGGACTGCGGAAGCTGTCTGATCAACTT
CAGTTTCGTCCAGGACATTGCGGACTCTACCGAAAAGGTTTACGTATCCG
ACCATCGCTACAGAGAGGAAAAAGCCGACGATAGCTTGGAGCGCGGTGAG
GGTTACATACTCCGCGAGGAGAATGACGCCATCTTTTACGTTGGTGTCGA
CAAATACATCAAATTAAGCGGGAACGTCCACGCCCACACGTTTCGGCTAA
CAAGTTTCTGCTGAAAGTCCAGCGTGTGGGATTGAATACACTACCGATGC
AAGCTTTCTAGACCAT
FMO08587.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12674-RA | 1219 | CG12674-RA | 159..1100 | 9..948 | 4630 | 99.6 | Plus |
| CG12674-RB | 1216 | CG12674-RB | 159..1097 | 9..948 | 4590 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2080208..2081066 | 56..913 | 4245 | 99.9 | Plus |
| 2L | 23513712 | 2L | 2080077..2080123 | 9..55 | 235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:42:10 has no hits.
FMO08587.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:36:43 Download gff for
FMO08587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12674-RA | 95..1047 | 4..953 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:17 Download gff for
FMO08587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12674-RA | 153..1105 | 4..953 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:28 Download gff for
FMO08587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12674-RA | 153..1105 | 4..953 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:28 Download gff for
FMO08587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2080071..2080123 | 4..55 | 94 | -> | Plus |
| 2L | 2080208..2081066 | 56..913 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:17 Download gff for
FMO08587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2080071..2080123 | 4..55 | 94 | -> | Plus |
| arm_2L | 2080208..2081066 | 56..913 | 99 | -> | Plus |
