FMO08621.5prime Sequence
1156 bp (1037 high quality bases) assembled on 2010-06-21
> FMO08621.5prime
CAGTCGACATGCATAGTGCTGACTTAACTAGCCACACCGATGTGACGGAA
ACCACCAATCTTGCCGCCATTGAGCAGTTGAAGGAACAGCGATTCAACGA
GAAGAATCTGATCATATACAATCCGCCTGGAGAGAATGACGAACTTTCCG
CCAGATTCCTGCGCAGCCTAGCTTTTGCCACCTTCAAGCGAAGATCGCCC
GCATTTTTGAGGGATTTGATCACATTCCTACAGGATCGTGAGGCGGATAT
AATTGAACAGTGCGGGGACTATGCCCATTTCGATTTGAAGCGCACCATCT
GGAGCCTGGAGCTGCTGCGCGATGATATAATCAACAACAGGGAGTTCCAG
ATAATTCGCGTCAAGTCGCCGGACACTGACAGCTGGAACTCGTTCCTCAA
GGGTCTTGGAGAGGACAGAAGGCAGTGGTTTTCGGCAATTTGGCTGCATG
CGGATTGCTACATGTACCGCCGCATTTGGTCGATCTTCCAGCGATCCGAA
ACCCTGAAAAATTATGATTACTTCGGTGATCAAAAGACGTCCATTGTTAC
CAATGTGGCGCCACTGATGAGGGACATCCTAGTCTCAACCAAAGGCATTA
AGCGCAGCCAGGAGGACTTTCAGTATCTCCTAAAACTATCTACGTGGTCC
AATCACGGTGACCTAAACATCACAAGAAGGGGTGCGCATGACAAAATCTA
TAAACAGATTGCCAAATACGACATTGATTTGCTGGCGGATCAGTCGTTCG
ATGTTTGGCAGGATCTCATCGAGGCCAGTGCGCCCGTCTACGTGGACATC
GTGTGCGACAATGCGGGATTTGAGCTCTTTGCGGATCTGCTGCTGGGCGA
GTACATCATAGAATCGGGCTTGGCCAGTCGGGTGCGGTTCCATGTGAAGG
CTATACCGTGGTTCATCTCGGATTGCACGCACAAGACTTTAACTGGCTAG
TAAAGTTTCTTCGCAAGCACGAGTTCCAGGAATTGAATGCCTTTGGTAAG
CGAATACGTGGCTAATATAAGGATCGTTCCTTTTATTCCTGTGCGACAAA
GCTACTTCTGGAACAGATGGTCCCGACTACAGCCAGAATGAAGCGGGTGC
AACCTTGCCTGTAGTTTCATTAGCCAGGCATCCCTGTGTGAAATCGTAAA
GGAAAT
FMO08621.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11475-RA | 1562 | CG11475-RA | 104..1235 | 5..1136 | 5315 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22070052..22071183 | 1136..5 | 5125 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:21:44 has no hits.
FMO08621.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:02 Download gff for
FMO08621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11475-RA | 100..1250 | 1..1153 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:29:32 Download gff for
FMO08621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11475-RA | 100..1250 | 1..1153 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:12 Download gff for
FMO08621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11475-RA | 100..1250 | 1..1153 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:12 Download gff for
FMO08621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22070037..22071186 | 1..1153 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:29:32 Download gff for
FMO08621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17957542..17958691 | 1..1153 | 97 | | Minus |
