FMO08623.5prime Sequence
1135 bp (1007 high quality bases) assembled on 2010-06-21
> FMO08623.5prime
CAGTCGACATGGCCAACCGTATGAGAGGAGGAGCCTGCTGTCCTTCAAGA
TGTCAGCCCGCCTGTCCACCATGTCCGCCACCTGGTCCGCCCTGCGATGC
ACCTCTGGTGCGACTGGATAAACTGTGGCCGGAGCCCTACAATCCTTGCT
CCTTCAAGAATTGCCTGATCTTTGGCGGTCACGATGAGCCCTATATTCGA
CCCTTTGATCCTAAGGGTTGTACACGAATGCGTCGCAATGATATCGACCG
ATCGTTGGGCTATCCCATAGGCGTAGTGTCTGGTACGACTGTTGTAAAGT
CGGGCATTCCGAATCAGGAGAGCGTCCGGTTTGCTTCAAATCTTAAGGCA
TTTGCTCATTCCTATTACACGCGGCGCGATGAATGGAAACCGGATACGAT
CGATATGGTGGTGAACGAGGGTCAGGTTTTGTTTAACGATTCCGAGAACA
TGGACCCTCCGAATGCATCAGACTCGCCGGATATCTACGATGAAAATGAG
CAAAAGGTGACGCGCCACTTTAAGATCAACGATATCGAGTTTGCCATGGA
GTTGGAGGCGCCCTTTGAGGTCTATGGCTACGAAAACGTCATACGCAATC
TACGCAGAATCTTAAGAGCCTTCTTCAAAAAGGCCAAATACGGTGTGTTC
TTCACACCCAATTGGTATCTGCTGATTTGGAAAGAGAAGTGGTGTTTGGA
TGGTACTCGATTTGAATGGCAGGGACAAAAACACGATGAAACCGAACAAT
GAAGAGGGGTATCCCCTATTGTTAGGCCTCAAGTCCTTCGATAATGTTGT
TTGGTTGATTAAAAAGGAGAGCTATCTTGATAAGAACGCTAAGTTTTCAA
TTATAGAAATCCTCGTTGTTCGTTTGGCCACCTCTGGAAGTACTGGTCAA
AGTTGGGAGCGAGACATGGCATGCGAATGAGTCAGTTCGATGTGATGCCT
CCGATTATGCGTATGTCAAGTCAAATCTCATCTCACCCTAAACTCGAAGA
TGCGCTAAGTATCGTATGCTCTTACTGGTGGCCCGTGCACTGCATGCCAT
CGAGATCGATCCATTCCAGCCACTTGCGACAGAAAATGTACGAATAGTCA
TGTGCCTTTGCCGTTAAATGTGCAAACTGCTGAAA
FMO08623.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4669-RA | 2101 | CG4669-RA | 145..1269 | 9..1126 | 5000 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5234770..5235678 | 104..1009 | 4255 | 99.1 | Plus |
| 3L | 28110227 | 3L | 5234627..5234721 | 9..103 | 475 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:37:41 has no hits.
FMO08623.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:11 Download gff for
FMO08623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4669-RA | 143..1141 | 1..999 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:22 Download gff for
FMO08623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4669-RA | 139..1137 | 1..999 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:09:03 Download gff for
FMO08623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4669-RA | 139..1137 | 1..999 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:09:03 Download gff for
FMO08623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5234621..5234721 | 1..103 | 96 | -> | Plus |
| 3L | 5234770..5235667 | 104..999 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:22 Download gff for
FMO08623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5227721..5227821 | 1..103 | 96 | -> | Plus |
| arm_3L | 5227870..5228767 | 104..999 | 99 | == | Plus |
