FMO08626.5prime Sequence
1073 bp (953 high quality bases) assembled on 2010-06-21
> FMO08626.5prime
CAGTCGACATGGGCAGCGAGGACACAAGCTTTATTCCCGATCTTCCCAGC
GGTGGACCATTGGCCGTTTATAGGAAGAGGGCCAACTTCGACTGGAAGCG
ATTGCGACTGATATTCGAGAAGGAGCAGGGATTGCGAATTAAGTACAAAG
TGTGGCGTCGCCTGGAGAATGACCCGCTTTTTGCCCACCCATCCCGCACA
CTGCCCATGGACGAGCAGAAGCGCCTGTGCGCCATGCAAGTGAATCGCAT
GAAGCACCTGGACCTGGTGCCCAAGGAGATCGAGAGCCTGAGCTTCTCGG
CCAAAACAAAGTATCTGATGTACATCAACGAGGCGTTGGCCTGCTACTCG
CCCAGTTTGTCGGTGAAGATAGCCCTGGGCGTGGGCCTGTTTAACAATGC
CATTCGTGCCATGGGAACCGAGAAGCACCAGAAATATATTGAGGCAGCTT
GGAATCGGGAGGTTATCACCTGCCTGGCCATCACGGAGCTATCGCATGGC
AGCAACACGAAGAGCATCCGGACAACGGCCACCTATGATCCGACCACCCA
GGAGTTTGTGATCAATACGCCGGACTTCGAGGCGGCCAAGTGTTGGGTGG
GAAATCTGGGTAAAACGGCCACGGTGGCCATGACTTTTGCTAATCTCTAT
ACAGCTGATGGCCAGAATCATGGGCTCCACGGCTTCCTGATTCCCATTCG
CGATCCCAAGACACTGCTCTCATATCCTGTAGTTCTGGTCGGCGATATTG
GGGAGAAGTGTGGGCTGAATGGCATTGACATTGTATTTGTGGTCTTCACC
AACTACCGAATTCCCCGGGACAACCTGCTCAATCGCACCAGTGACGTCAC
TCCGGAGGGGTCTACGTAAGTGTGTCACGACCGAAAGTCTTGGGCTGCAC
TCGAGAGCTTCTCGCGTCGCATGCATATGCAGATCGGCATACTCTGTGCA
TGCGTCGTATCCATTCGTACTGCATGAGACCATTGGCCCGACGGCATGCA
GAATTGCCATCTGATTCATGATCATCGATCTCTTCTGTGCTGCTGGTCAA
AATTGCCTGAACGAAGCCTATTG
FMO08626.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:53:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17544-RD | 2553 | CG17544-RD | 173..1133 | 9..950 | 4155 | 96.5 | Plus |
| CG17544-RB | 2474 | CG17544-RB | 94..1054 | 9..950 | 4155 | 96.5 | Plus |
| CG17544-RC | 2565 | CG17544-RC | 185..1145 | 9..950 | 4155 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19392257..19392991 | 875..142 | 3430 | 98.1 | Minus |
| 2L | 23513712 | 2L | 19393497..19393631 | 143..9 | 660 | 99.3 | Minus |
| 2L | 23513712 | 2L | 6446927..6446985 | 607..549 | 190 | 88.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:53:05 has no hits.
FMO08626.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:23:43 Download gff for
FMO08626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17544-RB | 74..1051 | 1..959 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:29 Download gff for
FMO08626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17544-RC | 179..1156 | 1..959 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:45 Download gff for
FMO08626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17544-RC | 179..1156 | 1..959 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:45 Download gff for
FMO08626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19392211..19392989 | 144..913 | 97 | <- | Minus |
| 2L | 19393497..19393635 | 1..143 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:29 Download gff for
FMO08626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19392211..19392989 | 144..913 | 97 | <- | Minus |
| arm_2L | 19393497..19393635 | 1..143 | 96 | | Minus |
