FMO08634.5prime Sequence
1152 bp (1034 high quality bases) assembled on 2010-06-21
> FMO08634.5prime
CAGTCGACATGCTGCGCGTTTTGAAGACCGGTGCCCTGCTGCGTTCCCAG
GCCAAGAACTTCGCAGCAGCTGTTGCGAACTACTCCTCCCTCCCGCAGCC
ACAGACAACGCCCGATATCCTCTACACCGGGGTATTTATCAACAACGAGT
GGCACAAGAGCAAGTCGGGCAAAATATTTGAAACCATCAACCCGACCACA
GCGGAAGTCATTGCCGAAATTCAGTGTGCTGATAAGGAAGATATCGATAT
TGCCGTCCAGGCTGCACGCAATGCATTCAAGTTGGGATCTCCATGGCGTC
GCATGGATGCCTCGGAGCGGGGTCGCCTGCTCTACCGCCTGGCTGATCTC
ATGGAACGCGATCAGGTCTATCTTGCCAGTCTGGAGACCCTTGACAACGG
CAAGCCCTACAGCATGTCCTACAACGTGGATCTCCCGACTGCCATCAAGA
ACCTGCGCTACTTTGCTGGATGGGCGGACAAGAACCATGGCAAGACTATT
CCCATGGACGGAGATTTCTTCACTTACACCCGCCATGAACCCGTGGGCGT
GTGCGGCCAGATCATTCCCTGGAACTTCCCCATCCTGATGATGGCCTGGA
AACTGGGTCCCGCTTTGGCTACCGGCAACACCATTGTACTAAAGCCCGCT
GAGCAGACCAGTTTGACTGCTCTGTACATTGCCCAGTTGGTGAAGGAGGC
TGGCTTCCCCGAAGGTGTGGTCAATGTGGTTCCCGGATTTGGAACTGCTG
GCGCTGCCTTGGCGAACCACTGCGATGTGGATAAGGTGGCCTTCACCGGT
TCCACCGATGTGGGCAAACTTATCCAACTAGCATCGGGAAATACTAACCT
AAAGAGAGTGACACTGGAGTTGGGAGGCAAGTCGCCAAACATTATTCTGT
CTGACACCGATATGGACTACGCCGTCGAGACGGCTCACTTTGGTCTGTTC
TTTAACATGGGCCAGTGCTGCTGTGCAGGATCTCGTTACTTTCGTGGAGG
AAAAGATCCTACGATGAGTTGTCGAGCGCAACGCGGAGCGGGCTTAAAAC
TCACCGGTGGGGCATTCCCTTTGAATCTGGAACACTGAGCAAGGTCCTCA
AGGGGACCGAGGAGACAGAAGTGAAAGAATTCTTGGAATGTATCAAAACA
GG
FMO08634.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aldh-RB | 1900 | CG3752-RB | 210..1345 | 9..1152 | 5250 | 97.9 | Plus |
| Aldh-RA | 2070 | CG3752-RA | 380..1515 | 9..1152 | 5250 | 97.9 | Plus |
| CG31075-RB | 1764 | CG31075-RB | 631..845 | 528..742 | 295 | 77 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9390246..9390911 | 378..1044 | 3160 | 99.3 | Plus |
| 2L | 23513712 | 2L | 9389828..9389979 | 131..282 | 760 | 100 | Plus |
| 2L | 23513712 | 2L | 9387768..9387893 | 9..134 | 630 | 100 | Plus |
| 2L | 23513712 | 2L | 9390040..9390136 | 281..377 | 485 | 100 | Plus |
| 3R | 32079331 | 3R | 26986606..26986820 | 742..528 | 295 | 75.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:39:02 has no hits.
FMO08634.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:23:58 Download gff for
FMO08634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aldh-RA | 371..1484 | 1..1119 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:10 Download gff for
FMO08634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aldh-RA | 371..1484 | 1..1119 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:05 Download gff for
FMO08634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aldh-RA | 371..1484 | 1..1119 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:05 Download gff for
FMO08634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9387759..9387890 | 1..131 | 96 | -> | Plus |
| 2L | 9389829..9389977 | 132..280 | 100 | -> | Plus |
| 2L | 9390040..9390136 | 281..377 | 100 | -> | Plus |
| 2L | 9390246..9390981 | 378..1119 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:10 Download gff for
FMO08634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9387759..9387890 | 1..131 | 96 | -> | Plus |
| arm_2L | 9389829..9389977 | 132..280 | 100 | -> | Plus |
| arm_2L | 9390040..9390136 | 281..377 | 100 | -> | Plus |
| arm_2L | 9390246..9390981 | 378..1119 | 97 | | Plus |
