FMO08635.5prime Sequence
1139 bp (1040 high quality bases) assembled on 2010-06-21
> FMO08635.5prime
CAGTCGACATGAAAAAAGAACTGTCCGGAAATAGCTCAGCCCGCTGGCCA
CAGATGTTCGGTGGGAATTCCAGAGAAGCAGGCATGTGGCAGCGCATACT
TTTGCTCGGCTGCATGTGGAGTGCATTTTTCATGTGCCGCAGCCGGGGGC
AACAAATCAACATTGGCGCCTTCTTCTACGACGATGAGCTGGAGCTGGAG
AAAGAGTTCATGACGGTGGTCAATGCCATCAATGGACCTGAATCGGAACA
GACGATGCGTTTCTATCCGCTCATAAAGCGCCTGAAGCCCGAGGATGGGA
GTGTCACAATGCAGGAACATGCCTGCGATCTCATAGATAATGGTGTCGCG
GCTATTTTCGGACCAAGTTCAAAGGCGGCGAGCGACATTGTGGCCTTGGT
GTGCAATAGTACCGGCATTCCGCACATAGAGTTCGACATATCGGACGAGG
GCATTCAGGCCGAGAAGCCCAACCACCAAATGACCCTTAACCTCTACCCG
GCCCAGGCCATATTGTCCAAGGCCTACGCGGATATTGTACAAAACTTTGG
GTGGCGCAAGTTCACCATTGTCTACGATGCGGACGATGCCAGGGCAGCAG
CTCGACTGCAGGATCTTCTGCAGCTGCGAGAGGTTCACAATGATGTGGTG
CGGGTGCGAAAGTTCCACAAGGATGACGACTTCCGGGTCATGTGGAAGAG
CATACGGGGCGAGCGGCGAGTGGTTTTGGACTGTGAGCCCAACATGCTGG
TGGAGCTTCTGAATTCCTCCACTGAGTTCGGTCTGACTGGACAGTACAAT
CATATATTCCTGACGAACCTGGAAACCTTACACCGATCATCTGGAGGACT
AGCGGCGGATAACGAAACATTTGCCGTGAACATAACTGCTGCTCGTCTTT
GGTCAATCCCGATCCTCCGCCGTACTCCCTACCTTACGGATATGTCACCC
AAAGGGACACATCGTTTACGAAAGCAGCGATCCGCCTCGCACCCTCATCA
CGACTTGATACATGATGCAACTGCAGCTTTTGCGCCAGTCTTGCGCAATG
CTGGCTTCTTTCTACCGAAAGGGATGGTGGTGCAGCGAATACTGCACCTT
GCCGCATCCGGAAGTTCGACCTGGCCACTGGCGTATCTG
FMO08635.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GluRIIC-RD | 3004 | CG4226-RD | 37..1147 | 8..1112 | 5115 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 915057..915269 | 588..800 | 1065 | 100 | Plus |
| 2L | 23513712 | 2L | 914799..915003 | 384..588 | 1025 | 100 | Plus |
| 2L | 23513712 | 2L | 914122..914280 | 8..166 | 795 | 100 | Plus |
| 2L | 23513712 | 2L | 914337..914493 | 165..321 | 785 | 100 | Plus |
| 2L | 23513712 | 2L | 915325..915447 | 801..922 | 470 | 97.6 | Plus |
| 2L | 23513712 | 2L | 915503..915678 | 918..1091 | 445 | 88.7 | Plus |
| 2L | 23513712 | 2L | 914552..914615 | 321..384 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:37:32 has no hits.
FMO08635.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:23:54 Download gff for
FMO08635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GluRIIC-RC | 29..1162 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:15 Download gff for
FMO08635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GluRIIC-RD | 33..1166 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:08:56 Download gff for
FMO08635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GluRIIC-RD | 33..1166 | 1..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:56 Download gff for
FMO08635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 914118..914279 | 1..165 | 98 | -> | Plus |
| 2L | 914338..914493 | 166..321 | 100 | -> | Plus |
| 2L | 914553..914615 | 322..384 | 100 | -> | Plus |
| 2L | 914800..915003 | 385..588 | 100 | -> | Plus |
| 2L | 915058..915269 | 589..800 | 100 | -> | Plus |
| 2L | 915325..915447 | 801..922 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:15 Download gff for
FMO08635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 914118..914279 | 1..165 | 98 | -> | Plus |
| arm_2L | 914338..914493 | 166..321 | 100 | -> | Plus |
| arm_2L | 914553..914615 | 322..384 | 100 | -> | Plus |
| arm_2L | 914800..915003 | 385..588 | 100 | -> | Plus |
| arm_2L | 915058..915269 | 589..800 | 100 | -> | Plus |
| arm_2L | 915325..915447 | 801..922 | 97 | -> | Plus |
