FMO08638.5prime Sequence
1151 bp (1011 high quality bases) assembled on 2010-06-21
> FMO08638.5prime
CAGTCGACATGATCGGAGTTCACTTCGTGTTTTTGTTGCTTCTCGGCGTG
GTTGCCTCCACCCAGGGAGCTAACATTTTGGGGCTCTTCAGCAGTCACAG
TCCGTCGCATCTGATAATCCACATGTCGGTGGCCAAGGCACTGGTCAAAG
CTGGACACAATGTGACCGTGGTGTCCATGCTGAAGCCCAAGGTGACGCAC
AAGGACATCCACCTGATTGTGGTGCCTATGAAGGAGGAGCAAGAACGCAT
CATGGAAGACCAAATGACCGAAATGGCCGGGCAAAAGAACTCACTGGTCA
GCACTATGTATCGCCTTCTAACCAGCATGGATGTTATGATCAATGCCCAG
GCGGAACTCCTATCCGACCCTCGGTTTCAGCGCATTTACGAGACCAAATT
TGATTTGATGATTTTGGGTTACTTCATCAACGACTTTCAACTGGGTGTCG
CCCATAAGCTAAAGGTGCCGGTAATTATTAATTGGATGTCGGCACCTGTT
CCGGCAATCGATAAGTATACGGGTAATCCCTCGGAGTTATCCTATGTGCC
CCTCATGGGAACTGTGGCCACGCAACCAATGGGCTTCCTCAAACGAACTG
AAAACGCTCTCAAATCCCTGCTCTTCGAATTCATTTTTGTTGTGTTTGAT
TACAAATTGACACGCATTTATAATGACGTCTTTCCGGAACAAGATATGCC
CACACTGAAGGAGTTGAGGAAGAATATCTCCATGGCCTTTGTCGGCTCCC
ACTTAATCAGTGAAGGACCTATTCGACCCCTGGTGCCAGCGCTAATCGAA
ATCGGAGGAATACAAGTAAAGGATAAGCCGGATCCTCTGCCCAAGGATAT
CGATCAGTTCATAAGCAATGCCAAGCAAAGGTGCTGTCTTCCTGTCACTC
GGCTCCAATGTCAAGAGTTCCCCTGTAAGCCAGAAATCGTACAGATCATC
TTTATGTCGCTGTCCGACTGAAGGAGACGTGATTCTGGAAATGGGGAGGA
TTTGGAGAACACACCCCGGTACCTCCTCCATTTTTCTTTATAAGAACTGG
CCTGCTCCAGACGAATATATGGCCGCATCCGCATTACAAACTCTTTATCC
ACACACCCTGGAAAGGGCGGCATTACGGAGCCACATACACGGATGTCCAA
T
FMO08638.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:02:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt36Ba-RB | 1799 | CG13270-RB | 26..1149 | 9..1135 | 5110 | 97.6 | Plus |
| Ugt36Ba-RA | 1617 | CG13270-RA | 26..1149 | 9..1135 | 5110 | 97.6 | Plus |
| Ugt37c1-RA | 1743 | CG8652-RA | 128..504 | 99..475 | 430 | 74.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:02:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16794236..16795359 | 9..1135 | 4890 | 97 | Plus |
| 2R | 25286936 | 2R | 16844535..16844911 | 475..99 | 415 | 74 | Minus |
| 3R | 32079331 | 3R | 12743486..12743612 | 187..61 | 185 | 76.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:02:22 has no hits.
FMO08638.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:25:14 Download gff for
FMO08638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Ba-RA | 1..1142 | 9..1151 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:46 Download gff for
FMO08638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Ba-RA | 18..1167 | 1..1151 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:59 Download gff for
FMO08638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Ba-RA | 18..1167 | 1..1151 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:59 Download gff for
FMO08638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16794228..16795377 | 1..1151 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:46 Download gff for
FMO08638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16794228..16795377 | 1..1151 | 96 | | Plus |
