FMO08648.5prime Sequence
763 bp (743 high quality bases) assembled on 2010-06-21
> FMO08648.5prime
CAGTCGACATGACCCACAATCTTGGTATGGCGCCATATCGATTGCCGGGT
CCAGCGGGCGGACTCTGTCCGCCCGATTTTAAGCCGCCGCCTCCCACGGA
CATCATCTCGGCGCCGAGCAATCCGAAGAAGCGGCGAAAAACCTCAAGTG
CCGCCAACTCCGCTGCAGCGGTGGCTGCGGCGGCGGCTGCAGCAGCTGCT
GCGAATTCCATGCAGCAGCAGCAGGCGCCACCCACACCGCAGGATTTGCT
GCCCCCTCCGCCAATGGGAGGCTTCGGAGACACCATTATTGCCTCGAATC
CATTCGACGACAGTCCCCAGGTGTCGGCGATGTCCAGCTCAGCGGCCGCG
GCGATGGCGGCCATGAATCAGATGGGCGGCGGACCAGGAGGTGGTCACTT
TGGCGGCGGTGGACCGGGTGGGCACCCGCACTGGGAAGACCGCATGGGCA
TGGGCGGTGGACCTCCTCCCCCGCCTCACATGCATCCCCATATGCACCCG
CATCATCCAGGCGGACCTATGGGTCACCCACATGGCCCACATCCGCACAT
GGGTGGTCCACCTCCAATGCGAGGAATGAGCCCCATGCACCCCCATCAAA
TGGGACCGGGACCAAGCGTCGGACTACCGCCGCATATGAATCACGGAAGG
CCAGGGGGACCTGGTGGTCCTGGAGGACCCGTCCAATGTGTAGTCCCATG
GGTGGCATAGCTGGCATGGGCGGCATGATCCCCTATGGGCGGATGGGTGG
CCCCAGCATATCA
FMO08648.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pygo-RA | 4507 | CG11518-RA | 1003..1758 | 9..763 | 3620 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31578875..31579630 | 763..9 | 3550 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:07:56 has no hits.
FMO08648.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:25:16 Download gff for
FMO08648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pygo-RA | 984..1748 | 1..762 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:47 Download gff for
FMO08648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pygo-RA | 984..1748 | 1..762 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:32 Download gff for
FMO08648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pygo-RA | 993..1757 | 1..762 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:32 Download gff for
FMO08648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31578876..31579637 | 1..762 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:47 Download gff for
FMO08648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27404598..27405359 | 1..762 | 98 | | Minus |
