FMO08654.5prime Sequence
239 bp (239 high quality bases) assembled on 2010-06-21
> FMO08654.5prime
CAGTCGACATGGTGCAGATGATATTCCTGTTTGCTATCCTTGCTGTAATG
ACCATTGTCCTAATGGAGGCCAACACTGTTTTGGCACGTGATTGCCTATC
TGGAACTTTCGGAGGTCCTTGCTGGGCCTGGAGTGGAGAAAAGTGCCGCC
GTCTCTGCATTGAGGAGGGACATGTCAGTGGACACTGCAGTGGCGCAATG
AAGTGCTGGTGCGAAGGATGCGCAAGCTTTCTAGACCAT
FMO08654.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Drsl3-RA | 360 | CG32283-RA | 31..251 | 1..221 | 1075 | 99.1 | Plus |
Drsl4-RA | 323 | CG32282-RA | 37..224 | 28..215 | 460 | 83.6 | Plus |
Drsl2-RA | 333 | CG32279-RA | 158..236 | 143..221 | 200 | 85 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3315026..3315246 | 1..221 | 1075 | 99.1 | Plus |
3L | 28110227 | 3L | 3315656..3315843 | 28..215 | 445 | 82.4 | Plus |
3L | 28110227 | 3L | 3314506..3314584 | 143..221 | 200 | 83.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:24:17 has no hits.
FMO08654.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:57 Download gff for
FMO08654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dro3-RA | 31..251 | 1..221 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:56 Download gff for
FMO08654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Drsl3-RA | 31..251 | 1..221 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:10:48 Download gff for
FMO08654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Drsl3-RA | 31..251 | 1..221 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:10:48 Download gff for
FMO08654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3315026..3315246 | 1..221 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:56 Download gff for
FMO08654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3315026..3315246 | 1..221 | 99 | | Plus |