FMO08661.5prime Sequence
957 bp (919 high quality bases) assembled on 2010-06-21
> FMO08661.5prime
CAGTCGACATGTCGCCTAACCGTGTTTGCTTGCCACTTGGCCTGCCGCTG
TTGCTTTTCCTGCTCGGTTGCCTTGTGTCCTCGACTCATGGCACCTGCAA
CGTCTGCAACACCGTCAACAATCTGACCTGCTACTCCTCGACCCAGATGC
AGTCCTGCCAGGTGGACGTCCTGTCCACGGCCACGCCCACCGATTGCCCC
AGCGGCTATGTCTGCGTCAGCGGCTCCAGCGGTGTGCTCTGCCAGCCGGA
GGACTCGGCATCTGACAGTCAGGCGGACTGCCAGGAGTGCAACAAGTGCG
ATGAGACCCAGACGTTCGCCTGCACCGGAACCCAGAGCTTCGCCCTCTGC
CTGGGCACAGATACCGTCCAGGATTCGGTGGGCACCTGTGCCTCCGGTTA
TGTGTGCAACATCAACGACACCCAGATATGCGGTCTGCCAGCGGATGGGG
TGATGCCGACCTGTTCGTATAGCGATGACTCAACCACAACCACGGTGAGC
AGCACCACCAGCTCCACCACAGCGGCACCACCTTCCACCAGCTCGGCATC
CACTTACTGTGCGGCGGTTCAGTCGCAGGGAAAATACGCGGTCGGATATA
ACGCGTATACGACCTGTCGCCAGTATATCTACTGCACTTTGGTTGACGGA
AGTTGGATTGGCCAGACCTACACTTGTCCGGGATCCATGTACTTCGATAG
TGCCTCCGAGATGTGTGTGTCCCACCATGCCCATCCACCTTTTCCACAAC
TGCAACAACGAGTTTCCACGACGACTGCGGCACCCACGACCAGTAATCCG
GAGGCATATTGCCAGGCGATGCAATCCGGCGGGCTACTACCCGGTGGGTA
CGGATGCCCACCACACGTGTCATCATTACATCGACTGCTTTCTGAACGGA
GGCTCTTGAGGAGGCATATGTACACATGTTCCCGGTTAACCTCTACTTAC
ACGTGTC
FMO08661.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13312-RA | 1061 | CG13312-RA | 12..949 | 5..947 | 4350 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8806756..8807202 | 451..5 | 2220 | 99.8 | Minus |
| 3L | 28110227 | 3L | 8805939..8806416 | 929..449 | 1995 | 96.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:02:46 has no hits.
FMO08661.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:49 Download gff for
FMO08661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13312-RA | 1..937 | 9..951 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:43 Download gff for
FMO08661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13312-RA | 7..952 | 1..951 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:43 Download gff for
FMO08661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13312-RA | 7..952 | 1..951 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:43 Download gff for
FMO08661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8805920..8806415 | 450..951 | 96 | <- | Minus |
| 3L | 8806758..8807203 | 1..449 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:43 Download gff for
FMO08661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8799020..8799515 | 450..951 | 96 | <- | Minus |
| arm_3L | 8799858..8800303 | 1..449 | 99 | | Minus |
