Clone FMO08663 Report

Search the DGRC for FMO08663

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:86
Well:63
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13484-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08663.5prime Sequence

479 bp (479 high quality bases) assembled on 2010-06-21

> FMO08663.5prime
CAGTCGACATGAGCACCCCTCGCAAGAACTATAACAACCTGCCGCCCTAC
TGCCCACAAGGCGGCCAGTACCCATCGCAGTCCGCGGATTACAGAGCGCA
GCAATTCGGTGGCCAGCAGAAGCCACAAAATCCAAACGTTGGCTTCTACG
AGGACAAACAGGGCCAGCAAAATGTTCCTCATTTCTACCAGAACAAATCC
CCACAGGAGCCGCAGCGCCATCGGCCCTACGGTCAGGGCAGGAATTTCGG
ACGCGGCGGCAGCTTCAATCGCAGGAACCAACAGAACTGGGATCATCCGA
GGAGCCACCAGAACAGGGAACAAAACCAGAGCGGCAGCTCCTTCGGCCAG
TACTTTCATCCCTCCATGCTGGAGGATCCTTGGCGGGAGCTAATGGAACG
GCACGAGGCCATCCACGGACCCAGTACTAGCCGAACTTCACCGAAAGAGG
TGGCGGCTTCCGCAAGCTTTCTAGACCAT

FMO08663.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG13484-RA 652 CG13484-RA 83..536 8..461 2270 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14052544..14052997 461..8 2270 100 Minus
Blast to na_te.dros performed on 2014-11-28 21:28:34 has no hits.

FMO08663.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:47 Download gff for FMO08663.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13484-RA 1..456 9..465 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:03 Download gff for FMO08663.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13484-RA 76..539 1..465 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:55 Download gff for FMO08663.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13484-RA 76..539 1..465 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:55 Download gff for FMO08663.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14052540..14053001 1..465 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:03 Download gff for FMO08663.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14045640..14046101 1..465 98   Minus