FMO08666.5prime Sequence
392 bp (392 high quality bases) assembled on 2010-06-21
> FMO08666.5prime
CAGTCGACATGCACTTGACATCCACGCTGATTGGACTCCTTATCTGCGGT
CTGGGGATCGAGCTGCCCACGCGCACTGCCGCACAATTCTGGTCGGTGGA
TCCTGTTACGCAGTGGCGAAAAGAGGCTCTGGCCGAGAGGGGATCCGGCA
TCTGTTACAGGACGCTCACCGTGGAAACCATCAATCCCAACTCCAGAAAT
CGTCAGTTCTCCTACTGCTGCGATGGTTATGTGAATAAGGGAACAAGCCA
GAACCTGAAGTGCGAGCCCATTTGCTCGGAGGACTGCTCCAATGGATTGT
GCCTGGCGCCCGAGGAGTGCGAGTGTGCTCCGGGTTACTATCGGAGTAAC
AAAAGGTGTCGTTTTGTCTTGGAAGCAAGCTTTCTAGACCAT
FMO08666.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NimB3-RA | 466 | CG34003-RA | 71..440 | 5..374 | 1835 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13967490..13967694 | 374..170 | 1025 | 100 | Minus |
| 2L | 23513712 | 2L | 13967751..13967915 | 169..5 | 810 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:44:15 has no hits.
FMO08666.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:44 Download gff for
FMO08666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nimB3-RA | 1..369 | 9..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:26 Download gff for
FMO08666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimB3-RA | 67..443 | 1..378 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:44 Download gff for
FMO08666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimB3-RA | 67..443 | 1..378 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:44 Download gff for
FMO08666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13967487..13967694 | 170..378 | 99 | <- | Minus |
| 2L | 13967751..13967917 | 1..169 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:26 Download gff for
FMO08666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13967487..13967694 | 170..378 | 99 | <- | Minus |
| arm_2L | 13967751..13967917 | 1..169 | 98 | | Minus |
