FMO08675.5prime Sequence
323 bp (323 high quality bases) assembled on 2010-06-21
> FMO08675.5prime
CAGTCGACATGCCCGTCACCTACAGGACTCGCACACTGCCGCAACAGCGG
AAGTTGGTCCCCAACCTACTGAGGTCCATACTACGCGTCCTGGAGGAGAC
GCGCCGACCCATGAGTGACAAAGAGTTGAACTTCGTCCTGGGCGTCCAGT
ACCGACGCAACGATCCGGAGTTCTATCGCCAAGTGCAAGTCAACCTGCGC
GATGGCGTCGAATACGGCATTCTGAAACGCCAGGGAAACCAGTTTTCGCT
GCGATCCCGACGCCTTGGTGAACTGATGTCTACTCTTGGATCCTCGCCAA
ACCGCGCAAGCTTTCTAGACCAT
FMO08675.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15577-RA | 508 | CG15577-RA | 94..391 | 8..305 | 1490 | 100 | Plus |
| CG15578-RA | 415 | CG15578-RA | 135..334 | 53..252 | 475 | 82.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4276610..4276907 | 305..8 | 1490 | 100 | Minus |
| X | 23542271 | X | 4277628..4277827 | 252..53 | 475 | 82.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:45:23 has no hits.
FMO08675.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:38 Download gff for
FMO08675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15577-RA | 1..300 | 9..309 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:06 Download gff for
FMO08675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15577-RA | 94..399 | 8..314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:18 Download gff for
FMO08675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15577-RA | 94..399 | 8..314 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:18 Download gff for
FMO08675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4276602..4276907 | 8..314 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:06 Download gff for
FMO08675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4170635..4170940 | 8..314 | 99 | | Minus |
