FMO08678.5prime Sequence
308 bp (308 high quality bases) assembled on 2010-06-21
> FMO08678.5prime
CAGTCGACATGACAAATCTACAACGCTGGCTATTTTACGCATCGCTCTTT
GCGATTCCCTATCTCTCCGTTGTTTTGGGAACAGTGCAAACGCCACTAAC
TACCAAGTATTTCCTGCACATTCAGCTTTTACCACTTTTGCTCCTCGTGA
TTTTTGGAATATATTCCGTTTGGACTGTTCTATATAGAACTCTGACTTTT
AACGATTGTCCCGAGGCCGCCAAGGAGCTGCAGGATGAAATTCAGGAGGC
TCGCAAGGATTTGATAGCCAAGGGATTTCGGTTTCTAGATGCAAGCTTTC
TAGACCAT
FMO08678.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33977-RA | 425 | CG33977-RA | 64..345 | 9..290 | 1395 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13402839..13402988 | 158..9 | 750 | 100 | Minus |
3R | 32079331 | 3R | 13402639..13402770 | 290..159 | 645 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:59:23 has no hits.
FMO08678.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:35 Download gff for
FMO08678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33977-RA | 62..343 | 9..290 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:43 Download gff for
FMO08678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33977-RA | 42..323 | 9..290 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:21 Download gff for
FMO08678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33977-RA | 64..345 | 9..290 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:21 Download gff for
FMO08678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13402839..13402988 | 9..158 | 100 | | Minus |
3R | 13402639..13402770 | 159..290 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:43 Download gff for
FMO08678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9228361..9228492 | 159..290 | 99 | <- | Minus |
arm_3R | 9228561..9228710 | 9..158 | 100 | | Minus |