Clone FMO08682 Report

Search the DGRC for FMO08682

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:86
Well:82
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG33308-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08682.5prime Sequence

602 bp (602 high quality bases) assembled on 2010-06-21

> FMO08682.5prime
CAGTCGACATGTCGAAAACAAATGAAACTTGTATAAATGGTGACATCGCG
CTGGAGAAAGAAGAATCACTTATCGATATTAGTAGCAGTTCTCTGGAGGC
TCAGCCAAATTTAAGCACTTCGGAATTGGAGACAATTGTGAGAAACGCCG
TTAAACAGATTCCAACACCTCCAAACTATGTCGACGTAACTGTGAATAGC
ATTGCAAATGCTATTCTGCCCAAAATATTAAACAAATATGATACGATCGA
AATGAAGGTTGAGAATATCCAAAAATCCCTGGACACTTATAGTCGGCAAG
CGGAAGCAGTGGATCAAGACATAGCTGAAATATTTTTGGATTTGCACACT
ATTTATAATAGGATCGAAAAACTCGATAAAAGTGGCAGTAAGTTATGCAG
CGCGAAAAAGGCAATTTTATTAAGACATGTTAAGAAGTCTGAAGACTTAC
TGAACCAGTCGCGCCATTATCTCACAAACGATCCCAAAGAGTTGAGTGCC
CATCTTGTTGGTCCACCAACGGAAGTCCCATCGATTCAAAAGGAGCACAC
AGCAAACTCGGACGGCAGGACGACAGGAAGTATCGCAAGCTTTCTAGACC
AT

FMO08682.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG33308-RA 909 CG33308-RA 105..680 9..584 2880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14802438..14802972 9..543 2675 100 Plus
2L 23513712 2L 14803020..14803064 540..584 225 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:59:28 has no hits.

FMO08682.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:42 Download gff for FMO08682.5prime
Subject Subject Range Query Range Percent Splice Strand
HDC02577-RA 105..683 9..588 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:48 Download gff for FMO08682.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33308-RA 105..683 9..588 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:25 Download gff for FMO08682.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33308-RA 105..683 9..588 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:25 Download gff for FMO08682.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 14802438..14802971 9..542 100 -> Plus
2L 14803023..14803067 543..588 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:48 Download gff for FMO08682.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14802438..14802971 9..542 100 -> Plus
arm_2L 14803023..14803067 543..588 95   Plus