Clone FMO08689 Report

Search the DGRC for FMO08689

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:86
Well:89
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34026-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08689.5prime Sequence

377 bp (377 high quality bases) assembled on 2010-06-21

> FMO08689.5prime
CAGTCGACATGAAATATCCCACAATTATTTTATTTGCGCTAGCCGCATTC
ATTTTGCCAACATTTGCCGCAAATGACTACCTGTGGGGTGAAGTTGGTGC
AGATGATTACCAATTGGCAAAGGATACGGTTTCGAAGGCGTTTTTCGTTG
GTCTAGTGCAGACGAAAAAATACGTATTCAAGCAGTCGGACAACCTAAAT
GCGTTGACCATTACGGCAATTAAGATTACCGACAAAAAGAAGAGTCACGG
AGCAACTGCTGTATTGGTCAGTGGAGGTCCTGGATCCAAAGGAGCAACTA
TTAAGTTCACTTCCGAACGAGGTTACGGCATCAAGGATATCGTGGAAATA
TGGGGTCGTGCAAGCTTTCTAGACCAT

FMO08689.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG34026-RB 747 CG34026-RB 27..377 9..359 1755 100 Plus
CG34026-RA 427 CG34026-RA 27..377 9..359 1755 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9533844..9534024 9..189 905 100 Plus
X 23542271 X 9534084..9534255 188..359 860 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:28:09 has no hits.

FMO08689.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:19 Download gff for FMO08689.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34026-RA 1..354 9..363 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:48 Download gff for FMO08689.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34026-RA 27..380 9..363 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:41 Download gff for FMO08689.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34026-RA 27..380 9..363 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:41 Download gff for FMO08689.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9533844..9534023 9..188 100 -> Plus
X 9534085..9534258 189..363 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:48 Download gff for FMO08689.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9427877..9428056 9..188 100 -> Plus
arm_X 9428118..9428291 189..363 98   Plus