FMO08694.5prime Sequence
566 bp (566 high quality bases) assembled on 2010-06-21
> FMO08694.5prime
CAGTCGACATGAAGCAGTTTCTATTTTGTGTACTAATAATGCTGATCGGC
AAAACTTGCGCATTGATTCCGAGAACCTATGAAACGCGTTTCATTTCGAT
TACCTCAAATGGCACCAACTTGTTCGATTTCAGCCAAATTAGGTTTTTGG
GCCGAGAACGCATGGCAAATGGCACTTTCGAATTGAAGGAGGATCTGGAT
AATGAATCATTTTCAGTCGTCGGTGAAACTTTCATCGATTCTGTGGGCGA
TGGCGAGTATAAGCAGCTTCCGTTTACCGCTCCCAAACAATCCGTCTGCA
CGGCATTGAAGGCCTATTGGTCGTACTTTGAGCCGAGTATAAAGTACGGA
GTTAAGACGGACTTTCCCGCTCATACCCATCCATGTCCCCTACCAAAGGG
AATATACTATATAAAGGATGTAGTTCTCAAAAACGACAATTGGCCAGTCA
TAATGCCGCGAGGTTATCTAAAGGCCGTGGCCAATCTTTTCAAAAATGAC
GAATATGGCGGCAGTCTAGAAATTGTTTCACAAATTAGCGACTTGTCTGC
AAGCTTTCTAGACCAT
FMO08694.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheA84a-RA | 582 | CG33779-RA | 9..548 | 9..548 | 2700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8204229..8204717 | 548..60 | 2445 | 100 | Minus |
| 3R | 32079331 | 3R | 8204771..8204822 | 60..9 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:45:16 has no hits.
FMO08694.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:24:31 Download gff for
FMO08694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33779-RA | 1..543 | 9..549 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:01 Download gff for
FMO08694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA84a-RA | 1..552 | 3..554 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:15 Download gff for
FMO08694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA84a-RA | 1..552 | 3..554 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:15 Download gff for
FMO08694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8204225..8204717 | 60..554 | 99 | <- | Minus |
| 3R | 8204772..8204822 | 9..59 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:01 Download gff for
FMO08694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4029947..4030439 | 60..554 | 99 | <- | Minus |
| arm_3R | 4030494..4030544 | 9..59 | 100 | | Minus |
