FMO08709.5prime Sequence
1165 bp (1036 high quality bases) assembled on 2010-06-29
> FMO08709.5prime
CAGTCGACATGTACAATTTGATAAAAAGTCGCACACTCTCCGACTACTTA
AAGAAGCCAATGCCGCCAAATTCTTTGAATAATGGCGGCAAAACAAACAA
TTCCGTGGGTAATACCAACAATCCGGCCGGAAATCTAAGTCCTGTTGCCG
AAGAATGTGTGCCGCATCCAAAGAACAAAGAGCGTACGCTCGTTGAGGAT
TTGGCCAAAATAAATAAACTGTTCGAGTATCTGGAGGCTTCAGCTACGGA
CGATATGGATTTAGATAATTCAACTGTCGAGGATGTGGGAAAGGAAAGTT
TATCGAATACGGTGCAGGCATGGAAAGAAGTTCCCAATATAAAAAATAAA
TATTTTATCGGAGAACAGGTGCCTGTGATGGATACTTCCGACTTTATGCT
TATTTCTCGCAACAAGGCAAAGAAGACTTTGCGTGCCAGGCAAATGCGTC
TTGAGCAGGAAAGAAAGGTGGCTCTGGAAGCCGCGAAATTGACCGAACAA
AAAGGCATGGGGGATCCTTCTTCGGTTCCAGGCAACGATAGCAACGATAA
TGAAGCCCAGCCAGTTGTGCATCTGTCTCGTTCGCCCATCAAATATTCTA
TGGATGAACGCACTGGAGTCAATCGCATGCGAGCCACCAAAAAGAAGCAG
ATCGAGCGTGCTCTTTTCTCTGAGAATTCGATGCAATTGGATCAGGAGCA
GATGCAACTAGCTGTCGAAGAAGACGAAAACCAAAAGGCTGACGGTCCGG
TGGCCGCTTTGACTCACAAAAGATATATACCCACCCACAAGGAATGGGAA
GAGCAGCGTCGTCTTAAGCCGAAAACTCGCAAACCACAGTGGACCAGATG
ACTCGGGCCACCACGATGACCGCCAAAAGATACATACCCACCACCAAGGA
ATGGGACGAACAGCGTCGTTTCAGGCTAAAGGCCAAGATGGAAACTAAAA
GACGCCACTTCGGCCATTCACTAACGAACTTGGGGCGGAGAACGCAAAGG
GAATAGCACTCATATGGAGCAAATATGATTGGACAAACCTACTCGTACAA
TAATAATTCAAAGATGGCCAGTCAGCAATGCCATTGAAGCGGCAAAAGAT
CGTCAGTGAGAAGGAATTGTTATACGTATACCATATGATATGCTGAGTTG
ACGCACCGACGATCT
FMO08709.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9777-RA | 1499 | CG9777-RA | 91..1231 | 8..1127 | 5100 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:00:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16631043..16631737 | 1038..352 | 3055 | 98 | Minus |
| X | 23542271 | X | 16631802..16632145 | 351..8 | 1720 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:00:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 5132..5211 | 407..319 | 136 | 67.4 | Minus |
FMO08709.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:32:13 Download gff for
FMO08709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9777-RA | 84..1157 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:24 Download gff for
FMO08709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9777-RA | 84..1157 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:00 Download gff for
FMO08709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9777-RA | 84..1157 | 1..1062 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:00 Download gff for
FMO08709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16631015..16631737 | 352..1062 | 97 | <- | Minus |
| X | 16631802..16632152 | 1..351 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:24 Download gff for
FMO08709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16525048..16525770 | 352..1062 | 97 | <- | Minus |
| arm_X | 16525835..16526185 | 1..351 | 98 | | Minus |
