FMO08710.5prime Sequence
850 bp (-68 high quality bases) assembled on 2010-06-29
> FMO08710.5prime
CAGTCGACATGAACGCCACATTAACTATATCGTTGCTCGCCAGTTATATG
CTTGTTATATATTCCGATTCTGTATCGGCAAATTATCTTTACGAGCAATG
CGGTCTTATGCGAGAAGAGTTTTCAACATCTTTGGGTCCCTGGACAGCTC
TACTGCACACGGATGGTATTATCTTTTGTGCCGGAACGCTGATAACTGAT
GTTTTCATACTGACTGCAGCGAGCTGTATTCGACCAAACGCCGTTAAAGT
TCGTTTGGGAGAGTTTGGCAGATATCCCAATGAATTGCCAGAAGATCATT
TGGTGCACTATTTTCTGATGTATCGGCTTTTCAACAATGAATCGCTAGCC
AATAACATCGGTCTACTGAAATTAACCAAAAGAGTGCAAATTACAGACTA
CATTATGCCGGTTTGCATTGTCCTCAACCCGCACAATCAGCAGCTATCGA
CTATGCGATTCATCGGAAATGCCTGGATGGAAGACAGCAATGTGTCCTTA
ACCAAGGAGTTACGACCCATTGTCATCCAGAGTAAGCCGAAGATGTGCAC
TAACCTTGACTTGTACACCCAGTTTTGTGCTGGCCACCAGGGCAATTTGA
GGTCATGCGACGGCCTCACCGGCTCGGCACTGATCCAGAATTCTAGATAT
ATGAACAAATATCGGCATATTCAGTTCGGCATCGCGACTGTGAACGATAT
GGATTGCGAGGAGTCACAGCGTTTATACCGATGTGTTGAAATTCTACTGG
TGGATCCAGGATGTGGTGTCACTGTTCATTCATTATTCACAAATGAGAGC
TATATTGTAAATGATTATATTAAGAAAACTTCGCAAGCTTTCTAGACCAT
FMO08710.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33460-RA | 946 | CG33460-RA | 27..846 | 9..828 | 3995 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15694698..15695132 | 394..828 | 2035 | 98.9 | Plus |
| 2R | 25286936 | 2R | 15694118..15694310 | 9..201 | 950 | 99.5 | Plus |
| 2R | 25286936 | 2R | 15694477..15694628 | 245..396 | 760 | 100 | Plus |
| 2R | 25286936 | 2R | 15694374..15694424 | 201..251 | 225 | 96.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:49:11 has no hits.
FMO08710.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:32:45 Download gff for
FMO08710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33460-RA | 1..836 | 4..840 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:22 Download gff for
FMO08710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33460-RA | 19..857 | 1..840 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:04 Download gff for
FMO08710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33460-RA | 19..857 | 1..840 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:04 Download gff for
FMO08710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15694110..15694310 | 1..201 | 97 | -> | Plus |
| 2R | 15694375..15694417 | 202..244 | 100 | -> | Plus |
| 2R | 15694477..15694628 | 245..396 | 100 | -> | Plus |
| 2R | 15694701..15695143 | 397..840 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:22 Download gff for
FMO08710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11582206..11582648 | 397..840 | 97 | | Plus |
| arm_2R | 11581615..11581815 | 1..201 | 97 | -> | Plus |
| arm_2R | 11581880..11581922 | 202..244 | 100 | -> | Plus |
| arm_2R | 11581982..11582133 | 245..396 | 100 | -> | Plus |
