FMO08712.5prime Sequence
401 bp (401 high quality bases) assembled on 2010-06-29
> FMO08712.5prime
CAGTCGACATGCGTGACAAAAGTCAGGAGCCATGTTGCCTGCCACTGAAG
GAGGAGTTCCAACGCTCCAAGTTCTCGCTGCATCACGATGATCCTGGCGA
CTTCTGTCGTTCGCAATGGCAGAAGGGCGATCGGAATATCATCTGGCTGC
TATATCGATGGATCCTGGCTGCTTTTTTCGCAGCGGGTGTGATCGGCAGC
ATGGTTGAAACCTTTAACGGTGGTCGCTGGTTTATTTATCTCACGGATTG
GGGTTTTTCCCTATGCTTTTATTGCTGTACATATGGCGCCATAATCGCCA
CCATCTACTTCATAAAGCCTTCTTATTTTGCTATTGCTCGTAGATGTACA
AAAACTATTAACAGGCTCCTGGCAGTTGGGCCCGCAAGCTTTCTAGACCA
T
FMO08712.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9555-RC | 1478 | CG9555-RC | 325..652 | 5..332 | 1625 | 99.7 | Plus |
| CG9555-RA | 1246 | CG9555-RA | 93..420 | 5..332 | 1625 | 99.7 | Plus |
| CG17906-RA | 971 | CG17906-RA | 100..396 | 36..332 | 450 | 77.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8992059..8992384 | 5..330 | 1615 | 99.7 | Plus |
| 2L | 23513712 | 2L | 8994490..8994784 | 36..330 | 440 | 76.6 | Plus |
| 2L | 23513712 | 2L | 8992456..8992491 | 330..365 | 180 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:49:01 has no hits.
FMO08712.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:32:43 Download gff for
FMO08712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9555-RB | 68..459 | 1..395 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:16 Download gff for
FMO08712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9555-RA | 90..420 | 1..332 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:00 Download gff for
FMO08712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9555-RA | 90..420 | 1..332 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:00 Download gff for
FMO08712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8992056..8992384 | 1..330 | 99 | -> | Plus |
| 2L | 8992457..8992491 | 331..365 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:16 Download gff for
FMO08712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8992056..8992384 | 1..330 | 99 | -> | Plus |
| arm_2L | 8992457..8992491 | 331..365 | 100 | -> | Plus |
