FMO08715.5prime Sequence
1178 bp (1064 high quality bases) assembled on 2010-06-29
> FMO08715.5prime
CAGTCGACATGGAATCCATGGAGGTTGATGAGTCTGCTGCCCAGCTCTAC
GTTCGCACGCCGGAGGATGTGAAGGCCATTGTGAAGCATGCGAAACTGGA
CGAGCGCCAGTTGACCCAACTCACCCAGGCTCTGTACTTTCCCTCGGCGG
ACGTGGATTCGGACAATCTGCGCCTTCTGGAGCTCGATGGGCACATGCTT
GGACAAATCCGCGACGGCCAGACGCTATATTTCAAGGGTGGCCAGAACGA
GAAGCTGGTGCTGTGCACCGATGAGCGAACGTACGACGTGAAGGGCGCGG
AAATATCCAATAGCCTTTTGCTGGTACCGGACCTCAAGTTTGCCGCCGCC
ACCAGCACCTCGCCGCTGAAGAGTCCGCGCACTGGCAACGCCAACGCCTC
CCTGGAGCGCAGCCTCAATGACAGCACGGAGGATGAACTGGAAGTGCCGC
GAACTCTGGAGCAGCGGCCGGTGCTCAAGGTGTTCCACGAGTACTTCGAG
TGCCGCGAGATAAAGCCGCGCTTTCGCAAGCTGGGTGAACTACTGCAGCT
GACTCGATATTCGGGGCCGGAGAACGAGTTCTGCGTGGAGCAGAAGCTAC
TCTTTACCTTTTCGCAGCTCCTGGACACGGTGCAGTGCAGCCGCGGTCAG
TTCATGGAGGGATTGAACCAATATCGAGCCATAGAACTGGACGGGCGAAT
GCGCGTGATGGAGTACGAATACGAGTATCGCATTATTAACATGATGCTGG
GTTTGATAAGCGAAAACTCCTGGGCCTTGGACGAAGTGGAACGGGAGGAG
ACCATCAATGCACTGAAGGGCATAGCTCCAGAGGATGTTGTGGCTGGGCT
GTTTGATATCTATACCATTCCCAGTGAACGTTGCCCGGGCAAGTTTGAGT
ACCAGGAGTCCTTGGTCTCCCTCATTGTGGCACAGAACATTCTTCAGCCG
GGTTTGCGCTTTCGCAACGAGAGTCATGCGCACCTGGCAAGAGGTACTGC
CCGAGGGCATGTCCTGCGACTTAAAGTACCTACGAAGTCTGGGCAATTGC
GACAAGGAGGGAGCGCGCCTTGCCTTACCCTCCCTGGCAGAAGAGTACTG
GCACCAAAATTTAAAGCGAATCGCCAGGCCGGCGCTATTAAGAAACTAAA
AAAGAAAATGGACAATGAGGAATGAAAC
FMO08715.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11788-RA | 1429 | CG11788-RA | 93..1236 | 7..1152 | 5280 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:04:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20274788..20275839 | 47..1096 | 4985 | 98.5 | Plus |
| 2R | 25286936 | 2R | 20274689..20274728 | 7..46 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:04:41 has no hits.
FMO08715.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:31:52 Download gff for
FMO08715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11788-RA | 1..1111 | 5..1110 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:12 Download gff for
FMO08715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11788-RA | 87..1200 | 1..1110 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:04 Download gff for
FMO08715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11788-RA | 87..1200 | 1..1110 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:04 Download gff for
FMO08715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20274683..20274728 | 1..46 | 95 | -> | Plus |
| 2R | 20274788..20275855 | 47..1110 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:12 Download gff for
FMO08715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16162188..16162233 | 1..46 | 95 | -> | Plus |
| arm_2R | 16162293..16163360 | 47..1110 | 98 | | Plus |
