FMO08718.5prime Sequence
1169 bp (1056 high quality bases) assembled on 2010-06-29
> FMO08718.5prime
CAGTCGACATGCCAACATTAAAGGACGTTGAGGAGGCCATTAGAGGATTG
AGACTCATTCAGTGGACTTATTCACTGCCAACTGCCGAAATGGCCAAGGG
AGTTCTTCAGGACATCCATCACAATACATCGCTGGATGGAATGCAGTGTA
TTACGATTGCCAGGCACATGGTAAATTATAAGGACTTTATTCGTGCCAAG
GAGTGGTTGATGGTAGGTTTAAAGATGTACGAGGCAGATGAAGAAATCGA
GTATATCTATTCCCAACTCGGAATGCCCTTGGTCGATTTTTACGAGCTTT
TCGTCGAGATTCAAGATGAACTTGGTTCTCGATACTTGGCCATGAGTGAA
CTGCAACTCGCTATTAAGAATTGGCCGGAAAAGGTCAGTCTGCAAAGAGC
CCTTTCTCGGCTAAAGATGAATATTCGCATTGGCAAGGAGCCAGCGGAAA
AGAAGAATAAGTCCAAAAGAGTCTATAAGAAATGCTGCAGTTCGGAATGT
CGACCTACCGCGAAACTTTATTGCTTGTACAAAACGACATCCTCGTATTT
CCTTCGATTGGCCCCTCTGAAGATGGAACTGCTGTCCCTCGATCCCTACA
TGGTGCTCTTTCATGATGTAGTTTCTGACAAGGACATTGTCAGCATTAGG
AACCTGACTAAGGGCAAACTTGCCCGAACCGTTACCGTGAGTAAGGACGG
AAATTATACAGAGGACCCCGATCGCACCACCAAGGGTACATGGCTAGTTG
AGAATAACGCATTGATCCAGAGATTATCGCAACTGACACAGGATATGACT
AATTTCGACATCCACGACGCGGACCCCTTTCAGTTTTGAACTACGGAATA
GGCGGTTTCTACGGCATCCACTTTGACTTTTTAGAGGATGCAGAATTGGA
CAACTTTTCGGATCGCATCGCCACTGCCGTGTTTTATTTGAGTGACGTGC
CCAAGGTGGGGCCACCATATTCCCGAAACTCGGACTCTCCGTGTCCCAAA
AGGGCTCAGCACTTCTGTGGTACAATCTGATCACAGGGCGATGGTGATAA
TAGAACAGCCCACCCAGCTTGTCCCACAGTGTGGTTCTAGATGGTCATGA
CCATGGATATGAAGACATTTTAGAGGCCTGTTGACAAGCATGCAGCCTCG
AACTTCGTGGCCGCGGCCA
FMO08718.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15539-RB | 1565 | CG15539-RB | 372..1476 | 9..1103 | 5270 | 99 | Plus |
CG15539-RA | 1615 | CG15539-RA | 422..1526 | 9..1103 | 5270 | 99 | Plus |
CG15539-RC | 1562 | CG15539-RC | 372..1473 | 9..1103 | 5215 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30507064..30507509 | 451..895 | 2180 | 99.8 | Plus |
3R | 32079331 | 3R | 30506629..30506830 | 125..326 | 1010 | 100 | Plus |
3R | 32079331 | 3R | 30506887..30507015 | 324..452 | 645 | 100 | Plus |
3R | 32079331 | 3R | 30506460..30506575 | 9..124 | 580 | 100 | Plus |
3R | 32079331 | 3R | 30507659..30507807 | 938..1080 | 485 | 94.6 | Plus |
3R | 32079331 | 3R | 30507562..30507603 | 896..937 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:49:43 has no hits.
FMO08718.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:31:48 Download gff for
FMO08718.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15539-RB | 366..1486 | 1..1113 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:39 Download gff for
FMO08718.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15539-RA | 416..1536 | 1..1113 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:23 Download gff for
FMO08718.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15539-RA | 416..1536 | 1..1113 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:23 Download gff for
FMO08718.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30506454..30506575 | 1..124 | 96 | -> | Plus |
3R | 30506629..30506828 | 125..324 | 100 | -> | Plus |
3R | 30506888..30507015 | 325..452 | 100 | -> | Plus |
3R | 30507066..30507509 | 453..895 | 99 | -> | Plus |
3R | 30507562..30507603 | 896..937 | 100 | -> | Plus |
3R | 30507659..30507823 | 938..1094 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:39 Download gff for
FMO08718.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26332176..26332297 | 1..124 | 96 | -> | Plus |
arm_3R | 26332351..26332550 | 125..324 | 100 | -> | Plus |
arm_3R | 26332610..26332737 | 325..452 | 100 | -> | Plus |
arm_3R | 26332788..26333231 | 453..895 | 99 | -> | Plus |
arm_3R | 26333284..26333325 | 896..937 | 100 | -> | Plus |
arm_3R | 26333381..26333545 | 938..1094 | 94 | | Plus |