FMO08722.5prime Sequence
1006 bp (831 high quality bases) assembled on 2010-06-29
> FMO08722.5prime
CAGTCGACATGCGCTTGCCGCTAATCTTTCATACCCTGCACCAGCGTCTT
CAAAAAATGTTTGTAAAGAGAACTGAGGGCGGCGAAAGTGCCACGCCCAG
CATTCAGGACATCGCCGGTCGACTGGCGGAGGAGCAGCAGCGGCTTCGCC
AATTGGAGGCCACAACGACTCCCAAAGAGCGGACAATTCTTGTCTTGGGA
AGCAAGTGTGTGGGTAAGACGACGGCCATTAATAAGTTCTTTGATCGCGA
GGAACACGCAACGCGGCCAACTCTAGCACTGGAGTACAGCTTTGGACGAC
GGATTGGCAGTGGAAAGTCACCGCAGGTGATGAACGTTTGGGAACTGGGC
TCCCTGGACAATGCCGAGCAATTGCTGGAAGTACCAATGCGGACACATGG
TTTGCAGCAACTAGCCGTCATCCTTATGCTAGATCTCTCCCAGCCACAGC
GATTTTGGACGGATTTGGAGTGCGCATACAAGGGACTGAGGGATACGGCG
CAGCAGATGATGGAGAAGGTAACACCGGAGCTTAGGGAAATCCTCGAACA
GCGAACAGTGGAGCGAGTGGGTCAGCAGAACAAAGATTCGGAAAAAACTA
GACCCTCTGCCCTTTCCAGTGATAATTGTCGGTGGGAAGTACGATGTGTT
TTCTGGTTTCGATCCCTATTATCAGGAAGCACACCTGCCGCTGCTTTGCG
ATCGATGGCCCACCTCATAGGTGGCGCATTGCTGTTCTATTCCCAGAAAG
ATGCCCAAGTTGGCCAATGTCCTGAGGGACACCATTTGTCACTTGGGAAT
TGGCAGTCCCTGCTCCTCCCTTTCGCTCTCATGTCGTGGACTTCAATGAA
CCACTGTGCATTTGGTTTGAAACGGACAGTTGGTCGAAATTGGTGATACT
GGCCGCCCAAAGTGTGGAGCGAATTGGACCCACATTCGGAATGGAAATTA
CCGCACCTGCACTAAAAGAAGCAAAATTCTAATAAAACCACCGATCCCGC
CCCAAG
FMO08722.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3769-RA | 1333 | CG3769-RA | 112..1098 | 9..1001 | 4455 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:00:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9435824..9436607 | 212..1001 | 3240 | 96.3 | Plus |
| 2L | 23513712 | 2L | 9435510..9435714 | 9..213 | 1010 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:00:16 has no hits.
FMO08722.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:32:08 Download gff for
FMO08722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3769-RA | 1..990 | 9..1006 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:21 Download gff for
FMO08722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3769-RA | 107..1101 | 1..1006 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:59 Download gff for
FMO08722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3769-RA | 107..1101 | 1..1006 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:59 Download gff for
FMO08722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9435505..9435713 | 1..212 | 97 | -> | Plus |
| 2L | 9435825..9436601 | 213..995 | 96 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:21 Download gff for
FMO08722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9435505..9435713 | 1..212 | 97 | -> | Plus |
| arm_2L | 9435825..9436601 | 213..995 | 96 | <- | Plus |
