FMO08729.5prime Sequence
914 bp (914 high quality bases) assembled on 2010-06-29
> FMO08729.5prime
CAGTCGACATGTTGATCGTACTACTGAGTGCTCTTGTGGCACCGTCAATT
GTCAGTGCCGCATGTGGCCAGTGTGTGGATGCGCACAGTTGCATCGGTGA
ATCGGAGTTTCAGTTGTGCTACGATGGTGTCCGGGACCAGACTATCAACT
ACACTTGCCCCGAATCAAAACCCATTTGCACAACCTACGGAATTATTTGC
ATGCCCAACGGCACGAGTATAGAACGCGGCTGTGGTGATGTCTCCAATTG
TGGTGTTTGCTCAGAATCCACAACTTTTGCCTGTACTTCAAGGACCACAT
TTGCTGTTTGCAACGGTGATGTTGTTTCCGCCAATAGTTTCGACTGTGCA
GAAGACTTTGTCTGCAGTGTTAAAAATGCAGCCAGCGGAAGTCCTTGTAT
TTCCCGGTGTGACTCATCAGACTCAGATATTTGTGATCGAGTTTTGGAAC
CCGAAGTGGAAAGCACCACGGCATCAGTGACTCCCACTGTCACATCCACA
GTCACTCCCATTGAGACTACTGCAGACCCATCCACAGTCATCACTGATTC
ATCGACAGGATCAACTGGGGATACCTCCACTGGATCGTCTTCCGTAACTT
CGTCGGACACATCAACGGACAGCACCGTGACTGTCACTGATTCAGGAAGC
ACTACCCAAAGTACTGCAACAACTCCAGCATTCAATGAAGACACCTATTG
CCAAGAGATCAACTCAACGGGTCGCTATCCCATACCCAATGACACAGTGT
GCACTAGCTACATCTACTGTGTTCTAAGGAGTGGAAGCTGGGCAGGATTG
CTCTATAATTGCAACGTGCAGAGACCTTATTTCGATGCTGATGTCTTCAG
CTGTGGTACTGTGAAGCCATCTTATGCCGGATGCACTAATTTAGTCGCAA
GCTTTCTAGACCAT
FMO08729.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34426-RA | 1022 | CG34426-RA | 9..897 | 8..896 | 4445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8802639..8803270 | 126..757 | 3160 | 100 | Plus |
| 3L | 28110227 | 3L | 8803334..8803474 | 756..896 | 705 | 100 | Plus |
| 3L | 28110227 | 3L | 8802471..8802591 | 8..128 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:00:35 has no hits.
FMO08729.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:31:30 Download gff for
FMO08729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34426-RA | 2..900 | 1..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:08 Download gff for
FMO08729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34426-RA | 2..900 | 1..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:53 Download gff for
FMO08729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34426-RA | 2..900 | 1..900 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:53 Download gff for
FMO08729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8802464..8802589 | 1..126 | 96 | -> | Plus |
| 3L | 8802640..8803270 | 127..757 | 100 | -> | Plus |
| 3L | 8803336..8803477 | 758..900 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:08 Download gff for
FMO08729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8795564..8795689 | 1..126 | 96 | -> | Plus |
| arm_3L | 8795740..8796370 | 127..757 | 100 | -> | Plus |
| arm_3L | 8796436..8796577 | 758..900 | 98 | | Plus |
