FMO08732.5prime Sequence
1162 bp (1065 high quality bases) assembled on 2010-06-29
> FMO08732.5prime
CAGTCGACATGAGCCACCGCTGTGAGATCCAATTGGACAACCCACGGGGG
GTCTATAGGGCCGGCGATACGGTCAATGGTCACGTCTATCTGACCCTTTC
GGAGCGGGCCCTAATCAAAGCAATATGCCTGGAGGCCAATGGATATGCGA
GCACTGCCTGGCAGCAGCCCCAAAAGCACAAGAATCAAAAAAAGAACGAG
CAGCCAGTGGTGGTTCAGAGTTTGGACTTTGATTATCGCGTGGATTATTT
TGCCAAAATCGATTATTTTGTGGGCTCGGAGGCCGCACAGCCACAGATAA
TGGAGGCGGGCACCTACAATTACGGTTTCCATGTGAAGCTGCCCAAGAAC
TGTCCGGGGAATTTCGAGGGGGGCCACGGACACATACGGTACACACTCCA
AGTACTCATCCACAGCAGTGCAGATCGTCCGCTGGAGGTGCTCCATGTAC
GCCAGCTGCAGATTTTCCCGCAGAACTCTCTGAGCCAGGAGACGCGGAGC
TGTGAGATCCAGATCTATGAGCAGACTCCTCGCCTTAGATTCTGGATGAA
GCCACTTCATCTGCAGCTCCAGATTCCCAGGCAGGGTTATTCGCCAGGAG
CAGGTATTTCTGTTCACTTAAAGCTGCATAACCCGGAGAAATTGACACTT
CGCGAGGCGGTGTATTCCCTCGTTCAGATCAGCACTTACGTTGCCCATCT
AAAGAATAAGCCCAAACGCTTGGAGACCAAGGTGGAGCGACAAACTGTCC
TAAGCAGCCGCCACGAGCTCCACAACCTCCCCCGTGGAGAACTGCAGAAT
TTTCAGCATCTTCACATGCTGCAAGTGCCACAAACAGCGGCCACATTGAC
TGTGGCAGGATGTGCCTGCCTGCAGCTCAACTACGAGTGGAGGTGCTGGT
CACACTCAGCAGAAAAGCGCTTAATTGCGGCCCGGATGCCGGTCATCATT
GGAAATGTGACGCCGCCCTGTCCTGCAAACTCCTAATGCAGGACCCATTG
ATGGCACTGCTCCGACAACTCCTCCAGTCGAAACAGCATCACATTGATTC
GATTTAGCATTCCACCAATCTTTTGCTTCGATTTCGGGAGCCGAGTTCAT
GCTAGCCACCATCTGAATAGAACAACTACTACCTGTCGGCCAACGTTGGA
TTTTAAACCCGC
FMO08732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:08:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18744-RB | 1336 | CG18744-RB | 25..1199 | 9..1159 | 5170 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:08:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7797411..7798341 | 1041..119 | 4280 | 98.8 | Minus |
| 3R | 32079331 | 3R | 7798636..7798747 | 120..9 | 560 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:08:52 has no hits.
FMO08732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:31:27 Download gff for
FMO08732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18744-RB | 25..1161 | 9..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:53 Download gff for
FMO08732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18744-RB | 25..1161 | 9..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:03 Download gff for
FMO08732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18744-RB | 25..1161 | 9..1126 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:03 Download gff for
FMO08732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7797371..7798339 | 121..1075 | 98 | <- | Minus |
| 3R | 7798636..7798747 | 9..120 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:53 Download gff for
FMO08732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3623093..3624061 | 121..1075 | 98 | <- | Minus |
| arm_3R | 3624358..3624469 | 9..120 | 100 | | Minus |
