FMO08734.5prime Sequence
968 bp (-85 high quality bases) assembled on 2010-06-29
> FMO08734.5prime
CAATCCACATGATGGAGACATTCCTCGTCCTGGGCCTGTGTTTCATCCTG
TACGAGGCATTGGATTTCTTTCAGGGCTGCATTCACAGGGTTACCCCATC
GCCCAGCGATCAAATCGAAGCCTATCGCCGCGAACTCGACGAACAGCGCC
AGCAGCAGCAGCAGGAACAATTCCTGGCAGGATTGACGCCGTTGCTAGGC
GCTCAATTTGCCGCTGCCGCCGCCGCCGCGGCTGCTGCCGCCGGTTCGCA
GTTTCGTTGGGCAGCACGACCACGCCCACCGCCTCCACGGCCAGCGTGAT
AAGTGATTCATAATATCAAGAATCGCAATCGCAATCGCAATCTCAATCAC
AGTCCCAGTCGGATCCAATCAGAATCAACAGCATTCGCTAAGCACTCCTG
GCCTGTTTCGTCCCGCCGCCTTGGGCTACTACCATCCGGATGATCCATTG
CATGCCACAAACTCCCTACCGCGCGACTTTTACTATCTACAGCAGCAGCA
GCTAAAGAACAAGGTCAGCTCAAGATCGCTACTCTCCAAGTTCTCATCGA
CCAATTCGGATAATCGCATACGTCCGGAGGCTGGAGCCGGTTCAGGGCAT
CATCATAGCGTACTTGGAGCAGCGTCTGTTATAACAAGTCAACCCTTACC
ATCTGGCGGTGAGATACCATCCAGTCTCTTCGATCAGCCGGGACAACCGG
CTGTGGTTGTGCCACCACTGCAATTGCAACCCTCATCACCGCTATTTGTG
GATCTTAAGAGGGCGATTATAGTCACAATCAAAGATCACAACCGATAAAG
TATCGGGCAAGAGAATCAATCGAAGAGCCACAGTGCCCTCAGTGCGAGGA
AGAGCACATACAGTATTTGGCCGAGACTTTGGACGATCTTGCCGAATCCG
ATGATCAGCGGTTTCGCCAGCGAAGACGAGACGACTACTACGACGAGCAG
GAGAGGACGAGGAGAGAG
FMO08734.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15465-RB | 19353 | CG15465-RB | 3189..4150 | 9..963 | 4275 | 96.8 | Plus |
| CG15465-RA | 16076 | CG15465-RA | 533..1494 | 9..963 | 4275 | 96.8 | Plus |
| rg-RR | 16076 | CG44835-RR | 533..1494 | 9..963 | 4275 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5175240..5176146 | 9..912 | 4115 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:37:28 has no hits.
FMO08734.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:31:42 Download gff for
FMO08734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15465-RA | 512..1447 | 9..938 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:40 Download gff for
FMO08734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rg-RJ | 2515..3468 | 9..955 | 96 | -> | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:52 Download gff for
FMO08734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rg-RR | 533..1486 | 9..955 | 96 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:52 Download gff for
FMO08734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5175240..5176171 | 9..935 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:40 Download gff for
FMO08734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5069273..5070204 | 9..935 | 97 | <- | Plus |
