Clone FMO08740 Report

Search the DGRC for FMO08740

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:87
Well:40
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34175-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08740.5prime Sequence

284 bp (284 high quality bases) assembled on 2010-06-29

> FMO08740.5prime
CAGTCGACATGGTGTGCCGCTTCAATCCCTTTTACATTGGACCAACTCCA
CCCAGCTGCTGCACGGATTTGAAGTCCGATTGCGATTGCCCGCCGTGCTC
ACCGGATACAGGGTATCAGGAGCCTCGACCCGTTCACGAGGAGTGCAACC
CGGGTGTGCCGAAGAAGGAGACCAAGGAGAGCAAGTGCAATCCTCCTTGC
AAAGAAGCCCCCAAAAAGGAAAAGAAGGAGAAGAAGTCCGAGAATAAAGA
GGCTAAAAAAACTAAAGCAAGCTTTCTAGACCAT

FMO08740.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG34175-RA 662 CG34175-RA 113..370 9..266 1290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3398135..3398392 9..266 1290 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:49:36 has no hits.

FMO08740.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:31:13 Download gff for FMO08740.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34175-RA 105..377 1..275 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:35 Download gff for FMO08740.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34175-RA 105..377 1..275 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:19 Download gff for FMO08740.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34175-RA 105..377 1..275 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:19 Download gff for FMO08740.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3398127..3398395 1..271 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:35 Download gff for FMO08740.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3398127..3398395 1..271 97 -> Plus