FMO08746.5prime Sequence
443 bp (443 high quality bases) assembled on 2010-06-29
> FMO08746.5prime
CAGTCGACATGCAGAATCCCATTTGTGAACCGTTCACCAGTTGGCCGGTA
AAGTTCGACATCAACCAGCTCATCAAGGAGTTCCAGCCCGAGGAGAAGGG
GCGCCAGGTAGATGAGGATAAGTCGCCGCGGGACTTTCTCCACCTACCCG
ACAACAACTGGGTGGTCCTGCCCAGTTTTAAGTACCAATTCGAGCACTTG
ACCCCGTATCTTTCCTGCCGCCAGAGCAAATATATGCGGTGCCGCTTTCA
GAAGTTTTTAGATAATGTTCCCAGCAGCTATGTGACCATCTCCTTGTATG
GCTCCAATGTGAGCAACATGCCTAAGCCGAGGCGAAAGAGTCTGAATGGC
CAGTTCTACGGGGTGGATAACAAACTGGCTCCTGTTCCGGCGGTCGCAGA
TCCTCGCTCTCCTCCGCACCGAAAGGCAAGCTTTCTAGACCAT
FMO08746.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34298-RA | 548 | CG34298-RA | 48..464 | 9..425 | 2070 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29999842..30000149 | 9..316 | 1540 | 100 | Plus |
| 3R | 32079331 | 3R | 30000211..30000319 | 317..425 | 530 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:25:23 has no hits.
FMO08746.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:31:25 Download gff for
FMO08746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34298-RA | 1..417 | 9..425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:43 Download gff for
FMO08746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34298-RA | 40..464 | 1..425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:35 Download gff for
FMO08746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34298-RA | 40..464 | 1..425 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:35 Download gff for
FMO08746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29999834..30000149 | 1..316 | 99 | -> | Plus |
| 3R | 30000211..30000319 | 317..425 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:43 Download gff for
FMO08746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25825556..25825871 | 1..316 | 99 | -> | Plus |
| arm_3R | 25825933..25826041 | 317..425 | 99 | | Plus |
