FMO08752.5prime Sequence
401 bp (401 high quality bases) assembled on 2010-06-29
> FMO08752.5prime
CAGTCGACATGAGCAGTCAAATTAAAAAGTCCAAAACGACCACCAAGAAA
TTGGTGAAATCATCTCCGAAAGCTCAACTTCCAAAAGCTGCGGCACAGAA
TCAAATTTTTAGTTGCCAATTCGAGGTGTTTGGTCATGTGCAAGGTGTCT
TCTTTCGCAAGCACACTCAAAAAAAGGCCATTGAGCTGGGCATAACTGGC
TGGTGCATGAACACAACTCAAGGAACGGTTCAGGGAATGCTCGAAGGATC
CTTGGACCAAATGACTGATATGAAATACTGGCTGCAGCACAAGGGAAGTC
CTCGTTCGGTGATCGAAAAGGCTGTATTCTCCGAGAATGAACCACTGCCC
ATCAACAACTTTAAGATGTTCTCGATTCGTCGCGCAAGCTTTCTAGACCA
T
FMO08752.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34161-RC | 563 | CG34161-RC | 66..440 | 9..383 | 1875 | 100 | Plus |
CG34161-RA | 577 | CG34161-RA | 66..440 | 9..383 | 1875 | 100 | Plus |
CG34161-RB | 553 | CG34161-RB | 66..425 | 9..383 | 1640 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10581500..10581637 | 146..9 | 690 | 100 | Minus |
2L | 23513712 | 2L | 10581260..10581372 | 272..160 | 565 | 100 | Minus |
2L | 23513712 | 2L | 10581094..10581205 | 383..272 | 560 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:16:11 has no hits.
FMO08752.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:58 Download gff for
FMO08752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34161-RA | 25..399 | 9..383 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:07 Download gff for
FMO08752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34161-RA | 66..440 | 9..383 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:08 Download gff for
FMO08752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34161-RA | 66..440 | 9..383 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:08 Download gff for
FMO08752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10581094..10581205 | 272..383 | 100 | <- | Minus |
2L | 10581261..10581370 | 162..271 | 100 | <- | Minus |
2L | 10581424..10581440 | 145..161 | 100 | <- | Minus |
2L | 10581502..10581637 | 9..144 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:07 Download gff for
FMO08752.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10581502..10581637 | 9..144 | 100 | | Minus |
arm_2L | 10581094..10581205 | 272..383 | 100 | <- | Minus |
arm_2L | 10581261..10581370 | 162..271 | 100 | <- | Minus |
arm_2L | 10581424..10581440 | 145..161 | 100 | <- | Minus |